KEGG   Brassica napus (rape): 106427528
Entry
106427528         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 2-like isoform X1
Organism
bna  Brassica napus (rape)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 106427528
NCBI-ProteinID: XP_048594720
Position
A8:12203279..12210958
AA seq 1745 aa
MDDFSGLLGLKPQGKSAPMAPSSSSPARNKSDSSPLFDDLSGGDDLLFSDSRSQTKPSDF
DYDAMFKDPKPVYDKPVYDEEDVFESLKTPSGGSQSARFDDLFSSHSVHRKNNSSPFDDL
IGNLSKPESEKRDEKGSSAFDDLIPGFGRASSPPAKRPTSETSHPQKPPYRTSSNLAEDP
FVVLESASTPREPPPSGGYTDPLDDIGLFNSRKTDHSFADIDPLDSLGKSGPDVSSRDKS
HLRPGNGSGSQSPVESSHTGSYHGKKVSFDEVLEPQSTSVPHATAPPYENKSLNSDGSFD
LSDDVWLTVSEIPLFTLPTSAPPPSRPPPPRPTRPMKKKANEPHSHVRTSARASVNSPTA
ASQMDDLDDFSMGKNHTAANGEDSDGYSTAVASAAAMKDAMDKAEAKFRQAKERREKDNL
KASRSMEGDPVDSYDSRERELRERQVRLDRERAEREAEMEKAQEREREERERKRVEKERE
RLLARQAVERATREARERAASEAHAKAQRAAVGKANTDARERAERAAVQRAHAEARERAA
AGAREKAERAAAEARERELSVAREKEAKVKAERAAVERAAAEARARATAEARARVAAQAK
AKQQENNNDLDSFFDSVSRPSSAPRQRTNPLVRFDIYFFLLYVIKKGHDGVEVTETQDFT
QVFIGKVPIMLRSTYCTLNGNSEKDLTELGECPFDQGGYFIINGSEKVLIAQEKMSTNHV
YVFKKRQPNKYSYVAEVRSMAENQNRPPSTMFVRMLSGSKGGSSGQFIRCTLPYIKKEIP
IIIVFRALGFVADKDILERICYEFGDTQMMELLRPSLEEAFVIQSQQVALDYIGKRGAPV
GTSKEKRIKYARDILQKEMFPHIGVGEFETPKAYYFGYVFSSLLFFEFHSALCFSYYAIT
LRLIIHRLLRCALGRNPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVD
NGKEVNLHFAIKAKTITSGLKYALATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRL
NSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAAYPILIFL
EEWGLETLEEISPADIPQATKIFVNGKWVGIHRIPDMLVRTLRLLRRRNDINTEVSVVRD
IRLKELRIYTDYGRCSRPLFIVDNQRLLIKKKDIYALQQRVKFIVFRSQSTFCCNFSVPI
LVFITQESAEEDGWHHLLVKGFIEYVDTEEEETTMISMTINDLVQARLRPDEAYSDTYTH
CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQ
KPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR
DEERKMGTLIKENFGRPDRGNTLGMRHGSYEKLDDDGLAPPGTRVSGEDVIIGKTTPISQ
DEAQGQTSRYTRRDHSLSLRHSESGMVDQVLLTTNADGLKFVKVRVRSVRIPQIGDKFSS
RHGQKGTVGMTYTQDDMPWTIEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAQMGKEG
DATPFTDVTVDNISKALHDCGYQMRGFERMYNGHTGRPLPAMIFIGPTYYQRLKHMVDDK
IHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAASFLKERLFDQSDAYRVHV
CETCGLIAIANLKNNTFECKGCKNTTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDLKS
AKGRK
NT seq 5238 nt   +upstreamnt  +downstreamnt
atggacgatttctcaggccttttaggtttgaagccgcagggaaaatcagctccgatggcg
ccgtcttcgtcgtccccagcgaggaacaagtccgattcatcgcccctcttcgacgatctg
agcggtggcgacgatctcctcttcagcgattcgcgatctcagactaagccctctgatttt
gactacgatgcgatgttcaaggatcccaaacctgtctacgacaagcctgtgtacgacgag
gaggacgtcttcgaatcgcttaaaaccccctcgggtggttctcaatcggctaggtttgat
gaccttttctcctcgcattcggtgcacaggaagaacaactcctctcctttcgatgatctg
attgggaatctgagcaagccggagagtgaaaaacgagatgagaaaggtagctcggctttt
gatgacttgattcctgggtttggtcgcgctagctcccctccagctaaacggccaacttca
gagacgagtcatcctcagaaacctccgtataggacatcttccaatcttgcagaagatcca
tttgtggtcttggagtctgcatctacccctagagaacctcctccctcaggagggtacact
gatcctttggatgatattggtcttttcaacagcagaaagactgatcattcttttgctgat
attgaccctctcgatagtcttggcaaatcagggccagatgtgagtagtagagacaaaagt
cacctgagaccaggcaacggcagtggctctcagtcaccggtggaaagttcccacactggg
agttaccatggtaagaaagtttctttcgatgaagttttggagccgcagagtacttctgtt
cctcatgctactgctccaccgtatgaaaacaaatcactcaattcagatgggagttttgac
ttatctgatgatgtctggcttactgtgtctgagatccctctatttacgctgcctactagt
gctcccccaccttccagacctccaccaccaagacctacacgtcccatgaaaaagaaggct
aacgagcctcactcacatgttcgtacctcagctagagcttctgtaaatagccctacagca
gcatctcaaatggatgatcttgacgatttttctatgggcaaaaatcacactgctgctaat
ggtgaagattcagatggttactctactgctgttgcatcagctgctgccatgaaggatgcc
atggataaagcagaagcgaagttcaggcaggctaaggaaaggagagagaaagacaatttg
aaggcaagtagaagtatggaaggcgatccagtggacagttatgattctcgggaaagggaa
cttagagaaaggcaagtgaggttggatcgtgaaagggcagagagggaggcagagatggaa
aaagcccaggaaagggagagagaggagagagagcggaaaagggttgagaaagaaagggaa
aggctgttggctagacaggccgtagagagggctacaagggaagcacgtgaaagagcagcc
tctgaggcacatgcgaaagctcaaagagctgctgttggaaaggctaatacagatgcccga
gaacgcgccgaaagagcagcggttcaaagagctcatgctgaagcacgtgaaagggcagct
gcaggggcaagggaaaaggctgagagagccgcagcagaagctagagaaagggaactttct
gtagcacgggagaaggaagcaaaggttaaggcagaacgagctgctgttgaaagggcagct
gccgaggcacgtgcaagggcaactgctgaggcacgtgcaagggtagctgcgcaagctaaa
gctaagcagcaagagaataacaatgatcttgactccttctttgactcggtttccagacca
agtagcgctccacgacagagaaccaaccctctggttagatttgatatctacttctttctg
ctttatgttattaagaaagggcatgatggtgtggaagttacggagactcaggattttacc
caagttttcattggaaaggttcccatcatgctccggtctacttactgtaccttaaatggg
aattcggagaaagatttgacagagcttggagaatgtccgtttgatcagggcggatacttc
attattaatggcagcgaaaaggttctgattgctcaagagaagatgagtacgaaccatgtt
tatgtcttcaagaagagacagccaaataagtattcctatgtcgctgaagtccgttccatg
gcggaaaaccaaaatagacctccgagcacaatgtttgtgcgtatgctctctggctcgaaa
gggggttcatctggacagtttattcgatgtactcttccatatatcaagaaagaaattcct
attatcatagtatttcgtgcgttgggatttgttgccgataaggacatattggaacgtata
tgctatgagtttggagatactcagatgatggagttgctcaggccttccttggaagaagct
tttgtgattcaaagtcagcaggttgcccttgactatattggaaaacgtggtgcgcctgtt
ggtacatccaaggaaaagagaataaagtatgcgagagatatccttcagaaagaaatgttt
cctcatataggagtcggggagtttgagacgccgaaagcttactacttcgggtacgtattc
agctcactcttgttctttgagtttcatagtgctttgtgtttctcatattatgcaataacc
ctcaggcttatcatacaccggctgctgcgttgtgcacttggccgaaatccagaagatgat
agggatcattatggtaacaaaaggctggatcttgctggtcctttacttggagggctgttt
agaatgcttttcagaaagctaacgagggacgtgagatcttatgttcagaagtgcgttgac
aatggcaaagaagtcaatcttcactttgccattaaggctaaaacaattacctctggcttg
aaatatgctcttgctactgggaactggggccaggcaaacgctgctggcacaagagctgga
gtctctcaggttctaaatcggttaacatatgcctccactttgtcacatctgaggcgtctc
aattctcctattgggcgtgaaggaaaattggcaaaaccaagacaactgcacaactcacaa
tggggtatgatgtgccctgctgaaacacctgaaggacaggcttgtggtctagtgaaaaac
ttggcgctcatggtctacgttacagttgggtcagctgcttatcccatcttgatatttttg
gaagaatggggacttgagactctcgaggaaatatccccagcagatataccccaagccaca
aaaatctttgtcaatggaaagtgggttggaattcatcgaattcctgacatgttggttaga
acgttgagacttttgagaagaaggaatgatattaacactgaagtcagcgttgttagagat
attcgtctgaaagagctcaggatatacactgactatggtcgctgtagtcgtcccttgttt
attgtggataatcagaggctcttaataaagaagaaagatatatacgctctgcaacaaagg
gtaaagtttatagtctttcgttctcaaagtacgttttgttgtaacttcagtgtaccaata
ctcgttttcataacgcaggaaagtgcagaagaagatggttggcatcatctacttgtaaag
gggtttatagaatatgtagacacagaggaagaggagactactatgatatccatgactatc
aatgatctggttcaagctaggctccgtcccgacgaggcatattctgacacttacacacat
tgtgagattcacccttctttgatattgggcgtgtgtgcttcaatcataccatttcccgac
cataatcagtcaccccgtaatacataccaatctgctatgggaaagcaagcaatgggaata
tatgtcaccaactaccaattccgcatggataccttagcctatgttctatattaccctcaa
aagccgctggtcaccacaagagctatggagcatcttcactttaggcaacttccagcagga
attaatgctattgttgccatttcttgctattctggatataatcaagaagattctgtcatt
atgaaccagtcttcaatagatcgtggtttctttcgatccttgttctttcggtcttacaga
gacgaggagagaaaaatgggaacccttatcaaagaaaactttgggcgcccagacagagga
aacacactgggtatgcgacatggttcgtatgagaaactggatgatgatggtctcgcacct
cctggtactagagtttcaggtgaagatgtaatcattgggaaaaccactccaatatctcaa
gacgaggctcaaggacaaacatcacgatacaccagacgtgatcacagtttaagcttgcgt
catagtgaatctggcatggtggatcaggtgttattgaccacaaatgcagatggtttgaag
ttcgtgaaagtgagggttaggtccgttcgtattcctcaaattggagacaaattcagcagt
agacatggtcagaagggaactgttggcatgacatacacacaagacgacatgccttggacg
attgaaggtgttactcctgatataatcgtgaatccacatgctatcccgtctcggatgaca
attggacagctcattgagtgtatcatgggaaaagtggcagctcagatgggtaaagaagga
gacgccactccctttacagatgtcacggtggacaacataagcaaagctctccatgattgt
gggtaccaaatgcgtggatttgagagaatgtacaatggtcacacaggcagaccactccca
gcgatgatattcattggaccaacctattaccaaaggttgaagcatatggttgatgacaag
atccactctcgtggacgaggtcctgtgcaaatcttaacaagacaaccggctgaaggacga
tcccgtgacggtggactgcgttttggagaaatggagcgagactgcatgattgctcatggt
gctgctagctttttgaaagagaggctgtttgatcagagcgatgcgtatagggtacatgtg
tgtgaaacctgtgggctcatcgccattgcaaacctgaagaataatacttttgaatgcaaa
ggttgcaagaacacaacagatattgttcaggttcacataccatatgcttgcaaattactg
tttcaagagcttatgtcaatggcgattgcgccacggatgcttactaaagacctgaaatca
gctaaaggcaggaagtga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system