KEGG   Brassica napus (rape): 106432426
Entry
106432426         CDS       T04128                                 
Name
(RefSeq) DNA mismatch repair protein MSH7
  KO
K08737  DNA mismatch repair protein MSH6
Organism
bna  Brassica napus (rape)
Pathway
bna03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    106432426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106432426
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     106432426
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II AAA_29 RT_RNaseH_2
Other DBs
NCBI-GeneID: 106432426
NCBI-ProteinID: XP_013728714
Position
A1:21147155..21153216
AA seq 1103 aa
MQRQKSILSFFQKPSQATQRSVPGDAATSGVGGLRSTAKERGINSDASVRSVERNVPKPV
DDDVRGVDTPPEKVPRRVLPSNFKAAESAGGASSLFSSIMHKFVKVDGPPECSGERNVAP
FRDSSVSKMPESVFPTNNAQPQDRDRTFCVYKPRLVEDDDVLGPDTPGTRPSVPRLKRVL
EDGVAFTENKASLFDSNKRMKLFEDRICGEKKDVNEGTKFEWLEPSRIRDANRRRPDDPL
YDRKTLYIPADVFKKMSASQKQYWSVKSEYMDVVLFFKVGKFYELYELDAELGHKELDWK
MTMSGVGKCRQVGISESGIDDAVQKLLARGYKVGRIEQLETSDQAKARGANTIIPRKLVQ
VLTPSTASEGNLGPDPVHLLAIKEVKMELEKCSTVYGFAFVDCASLRFWVGSISDDASCA
ALGALLMQVSPKEVIYESKGLSRESQQALRKYTLTGSTAVQLNPRPQEMGDADACGVRNM
IESSGYFRGSSESWNSAVDGLTESGIALSALGELINHLSRLKLEDVLKNGDIHPYRVYSG
CLRIDGQTMVNLEIFNNSFDGGPSGTLYKFLDNCVSPTGKRLLRNWICHPLKDIGSINKR
LDVVEEFTANSEIMQITGQYLHKLPDLERLLGRIKSTVQSSAYLLPALLGKKVLKQRVKS
FGQLVKGFRSGIDLLLAVQKESNIIRLLCKLCKLPILEGKGGLELFLSQFEAAIDSDFPD
YQNHDVTEENAETLTILIDLFIEKAAECSEVIHTISCLDVLRSFAISASLSAGSMARPVI
FPESKSTIQNQETNGPTLKIQGLWHPFAVPADGQLPVPNDLLLGEAGSSSIHPRSLLLTG
PNMGGKSTLLRATCLAVIFAQLGCYVPCETCELSLVDTIFTRLGASDRIMTGESTFLVEC
TEAASVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHMVERVKCRMLFATHYHPLTK
EFSSHPRVTLKHMACAFKSRSDQEPGGCDQDLVFLYRLAEGACPESYGLQVALMAGIPKQ
VVETASVAAQAMKRSIGENFKSSELRSEFSSLHEEWLKTLVGISQVVDDDKAMFEEEDVS
DMLICLWHEIRSSISVARVKAMR
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgcagcgccagaaatcgattctgtctttcttccagaaaccgtcgcaagctactcagcgt
tcagttcctggcgatgctgctactagcggcgtaggaggtttacgatctactgcgaaggaa
agaggcattaacagcgacgcctcggtacgctctgtggagcgaaatgtgccgaaacctgtg
gatgatgatgttagaggagtggatactccgccggagaaagttcctcgtcgtgtcttgccg
tctaacttcaaggcggctgaatccgccggtggcgcttcgtctctcttctccagtatcatg
cataagtttgtgaaagtcgatggtcctcctgaatgttctggcgagaggaatgttgctccg
tttcgtgattcatctgtatctaagatgcctgagagtgtttttccaacgaataatgctcaa
cctcaagatagagaccgtactttttgcgtatataaaccaagattagtagaagatgacgat
gttcttggcccagatacgcccgggacgcgtcccagtgttcctcgtttgaagcgagttctg
gaggatggagtggcttttactgagaacaaggcctctctatttgattctaacaaacggatg
aaactgtttgaggatcgaatttgtggagagaagaaagacgtgaacgaagggaccaaattt
gaatggcttgagccttctcggatcagggatgccaatagaaggcggcctgatgatcccctt
tacgatagaaagaccctctacataccagctgacgttttcaaaaaaatgtctgcgtcgcag
aagcaatattggagtgtcaagagtgagtatatggatgttgtgcttttctttaaagtgggc
aaattttatgagctgtatgagctagatgcagagttaggtcacaaggagcttgactggaag
atgaccatgagcggtgtgggaaaatgcagacaggttggtatctctgaaagtgggatagat
gacgcagtgcaaaagctattagctcgtggatataaagttggaagaatcgagcagttagaa
acatctgaccaggcaaaagccagaggtgcaaatactataataccgaggaagctagttcag
gtattaactccatcaacagcaagcgagggtaatctagggcctgatcccgtccatctcctt
gctataaaagaggtgaaaatggagctagaaaagtgttcaactgtatatggatttgctttc
gtcgactgtgcttccttgaggttttgggttgggtccatcagtgatgatgcttcatgtgct
gctcttggagctttattgatgcaggtttctccaaaagaagtgatatatgagagtaaaggg
ctatcaagagagtcccaacaggccctaaggaaatatacattgacagggtctacggcggta
caattgaatccacgaccacaagaaatgggggatgcagatgcttgtggagtgagaaatatg
atagaatccagcggatacttcagaggttcttctgaatcatggaactctgctgttgatggt
ctaactgaatctggaattgctcttagcgctcttggagaactaatcaatcatctttctagg
ctaaagctagaagatgtacttaagaatggggatattcatccctacagggtttacagtggt
tgtctaagaattgatggccagacgatggtaaatctggagatattcaacaatagctttgat
ggtggtccttcagggaccttgtacaaatttcttgataactgtgttagcccgactggtaag
cggctgctaaggaattggatctgccatcccctcaaagatataggaagtatcaataaaaga
ctcgatgtagtcgaagaattcacggcaaactcagaaattatgcaaatcacaggccagtat
ctccataaacttccagacttagaaagactgctcggacgcattaagtctactgttcagtca
tcagcctatcttttgcctgcccttcttgggaaaaaagtgctgaaacaacgagttaaatca
tttgggcaacttgtgaaagggttcagaagtggaattgatctgttgttggctgtacagaag
gaatcgaatataattaggctgctttgtaagctctgtaaacttcctatattagagggaaaa
ggcgggcttgagttattcctttctcaatttgaagcagccatagatagtgacttcccagat
tatcagaaccatgatgtgacagaggagaatgctgaaactctcacaatactcattgatcta
tttatagaaaaagccgcagagtgctctgaggtcattcacaccattagctgcctcgatgtc
ctgagatcctttgcaatctctgcaagtctctctgctggaagcatggccaggcctgttatt
ttccctgagtcgaaaagtacgattcagaatcaggaaacaaatgggccaacgcttaaaatc
caagggctatggcatccatttgcagttccagctgatggtcaacttcctgttccaaatgat
ctactccttggtgaggctggaagcagcagcattcatcctcggtcgttgttactaacagga
ccaaacatgggtggaaaatcaactcttcttcgtgcaacatgccttgctgttatctttgct
cagcttggttgttacgtgccttgtgagacatgtgaactctccctcgtagatactatcttc
acaaggcttggcgcatctgatagaatcatgactggagagagcaccttcttggtagagtgc
actgaggcggcctcagttcttcaaaacgcaactcaggattcactagtaatccttgacgag
ctgggcagaggaactagtactttcgatggatacgccatagcatattctgtttttcgtcac
atggtagagagagtcaagtgcaggatgctctttgcaacgcattaccaccctctcaccaag
gagttctcgtcacatccgcgggtcaccttgaaacacatggcttgcgcattcaaatcaaga
tccgaccaagaaccaggtggctgcgaccaagacttggttttcttgtaccgtctagccgag
ggagcttgtcctgagagctatgggcttcaagtagcactcatggcgggaataccaaagcaa
gtggttgagacagcatcggtggcggctcaagccatgaagagatcaattggagaaaacttc
aagtcgagtgagctaaggtctgagttctcaagtctgcacgaagaatggctcaagacattg
gtgggtatctctcaagtcgtcgacgacgacaaggctatgtttgaggaggaggatgtctct
gacatgttgatttgcttatggcatgagatcagatcttctatctctgttgcccgagtaaaa
gcgatgagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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