KEGG   Brassica napus (rape): 106433826
Entry
106433826         CDS       T04128                                 
Name
(RefSeq) pyridoxal 5'-phosphate synthase subunit PDX1.3
  KO
K06215  pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
Organism
bna  Brassica napus (rape)
Pathway
bna00750  Vitamin B6 metabolism
bna01100  Metabolic pathways
bna01240  Biosynthesis of cofactors
Module
bna_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00750 Vitamin B6 metabolism
    106433826
Enzymes [BR:bna01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.3  Amine-lyases
    4.3.3.6  pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
     106433826
SSDB
Motif
Pfam: SOR_SNZ ThiG Dus TetR_C_27 NanE NMO
Other DBs
NCBI-GeneID: 106433826
NCBI-ProteinID: XP_013730112
UniProt: A0A816HZA8
Position
C3:147950..149265
AA seq 309 aa
MEGTSVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
LERVPADIRAQGGVARMSDPQMIKDIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDES
EVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV
RSVMGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM
MQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDDK
VERFANRSE
NT seq 930 nt   +upstreamnt  +downstreamnt
atggaaggaacaagcgtcgtggcggtttacggtaacggtgcgataacggaggcgaagaaa
tctcccttctccgttaaggtcggtctggcgcagatgctccgcggcggtgttatcatggat
gtcgtcaacgccgagcaagctcgcatcgcggaggaagccggtgcttgcgccgtcatggct
ttggagcgagtccccgccgatattcgcgctcagggaggcgtcgctcggatgagcgatcca
cagatgattaaggacatcaagcaggccgttacgattccggtgatggcgaaggccaggatc
ggtcatttcgtggaggcgcagatcctcgaagcgatcggaatcgattacatcgacgagagc
gaggtcctgactctcgccgacgaagacaaccacatcaacaagcataacttccggatccct
ttcgtctgcggctgccggaacctcggggaggctctgaggaggatccgcgaaggcgcggcg
atgattaggacgaaaggcgaggctgggactgggaacattgtggaggccgttaggcacgtg
aggtctgttatgggtgacatcagggttttaaggaacatggatgacgacgaggtcttcact
ttcgccaagaagctagccgctccttacgatctcgtgatgcagaccaaacagcttggccgt
cttcccgtcgttcagttcgccgccggtggagtcgctactccggcggatgcggctctcatg
atgcagcttggatgcgacggtgtcttcgtgggttctggtatcttcaagagcggtgaccca
gctcgtcgggcgcgtgcgattgttcaggcggtgactcattacagtgacccggagatgctt
gtggaggttagctgtgggcttggagaagccatggttgggatcaatctcaacgatgacaag
gttgagaggtttgctaaccgctccgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system