KEGG   Brassica napus (rape): 111200942
Entry
111200942         CDS       T04128                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
bna  Brassica napus (rape)
Pathway
bna04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111200942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    111200942
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    111200942
Membrane trafficking [BR:bna04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    111200942
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111200942
  Exosomal proteins of other body fluids (saliva and urine)
   111200942
  Exosomal proteins of colorectal cancer cells
   111200942
  Exosomal proteins of bladder cancer cells
   111200942
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 111200942
NCBI-ProteinID: XP_048594726
Position
A8:12280185..12281688
AA seq 209 aa
MEVKLWNDKRERETYENFSELYAIIKATEKLEKAYIRDLISPSDYDTECQKLIVHFKTLS
ASLKDLVPSIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAAVASTSSSASVVAECVQN
FITSMDSLKLNMVAVDQVYPLLSDLSASLSKLSILAQDFEGKVKMKEWLVRLSKMGASDE
LTEQQARQLHFDLESSYNSFMAALPSAGN
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggtcaagctatggaacgacaagcgcgagcgcgaaacgtacgagaacttctccgag
ctctacgccatcatcaaagccaccgagaagctcgagaaggcctacatccgcgacctcatc
tccccttccgactacgacaccgagtgtcaaaaactcatcgtccacttcaagaccctctcc
gcatccctcaaggaccttgtccccagcatcgagaggttcgccgagacctacaagatggac
tgctcagctgccgtctaccgcctcgtgacctccggcgttccggctaccgtggagcatcgt
gctgctgcggtggcgtctacttcgagctctgcttccgttgtggctgagtgtgtgcagaat
tttatcacttcgatggattcgttgaagctgaacatggtggctgtagaccaggtgtatccg
ttgctgtctgatctctctgcttcgcttagtaagctgagcattttggcgcaggattttgaa
gggaaggtgaagatgaaagagtggcttgtgaggctgtctaagatgggggcttctgatgag
ctcactgagcagcaggcgaggcagcttcactttgaccttgagtcttcctacaactccttc
atggctgctttgcctagtgccggtaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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