KEGG   Brassica oleracea (wild cabbage): 106292165
Entry
106292165         CDS       T04124                                 
Name
(RefSeq) tRNA (cytosine(34)-C(5))-methyltransferase
  KO
K15334  multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:boe03016]
    106292165
Enzymes [BR:boe01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.202  multisite-specific tRNA:(cytosine-C5)-methyltransferase
     106292165
Transfer RNA biogenesis [BR:boe03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    106292165
SSDB
Motif
Pfam: Methyltr_RsmB-F FtsJ DUF2621
Other DBs
NCBI-GeneID: 106292165
NCBI-ProteinID: XP_013614782
UniProt: A0A0D3A128
Position
C1:complement(517016..520523)
AA seq 736 aa
MGRGRRHRGRSHRNQSEESRENAPKPLKSDAPFDSTIQNRTWSNLDFEEYYKEQRIVKAE
EWDSFIEILRKPLPAAFRVNSNGQFCDEILSMLENDFVKSLQAEAVESGEVEAIKPLPWY
PNNLAWHSNFSRKEIRKNQTLERFHEFLKLETEVGNMTRQEAVSMVPPLFLDVHPDHFVL
DMCAAPGSKTFQLLEIIHESAEPGSLPNGMVVANDVDYKRSNLLIHQTKRTCTTNLIVTN
NEGQHFPNCNSIASEKCHHPIDQLLFDRVLCDVPCSGDGTLRKAPDIWRRWNSGSGNGLH
SLQVVIAMRGLSLLKVGGRMVYSTCSMNPIEDEAVVAQILRRCGGSVELVDVSDKLPELI
RRPGLKKWKVHDRGGWYRSYKDVPKVQRDGVLRSMFPSGKSDKDSTTGEIASDESAEEVC
NLPLERCVRIVPHDQNTGGFFIAVLHKVSSLPDFQEKRRYTRGRNSSEKTSYEEVSDTVI
TTQPEENKEEIVVEEEAASDNGLKLEKETTSKEGTVELGKEVPPPVKGKWKGLDPVVFLR
DETVIDGIKRFYGINDESFPLNGHLVTRNSDTSTKGNVKRIYYVSRSVKDVLELNLAVGE
KIKVASVGLKMFEKQSARECEAGSCSFRITSEGLHVILPYMTKQLLYATMVDFKNLLQYK
SIKFTDFVHPQFGQKAAEVAEGYCVVILVDGAQKDGSEAVKVNSSTIAIGCWKGKASLTV
MVTTVDCDQLIQKLAC
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgggaagaggaagacgacacagaggccgttctcacagaaaccaatcagaagagagcaga
gaaaacgctccaaaacctctcaagtccgatgctcccttcgattccaccatccagaatcgc
acctggtcgaatctcgatttcgaggagtattacaaggagcaaaggatagtgaaagcagag
gagtgggattcattcattgagattcttcgtaagccattgcctgctgccttcagagtcaac
tccaatggccagttttgcgatgagattttatcgatgttggagaatgacttcgtgaagtct
cttcaggctgaggctgtggagagtggtgaagtggaggcgatcaagcccttgccttggtac
cctaacaatcttgcttggcattctaatttctctcgcaaggagattagaaaaaaccagact
cttgaaaggtttcatgagtttttgaagttggaaactgaagttgggaacatgaccaggcaa
gaagctgttagcatggtacctcctctcttccttgatgtgcatccagatcattttgtactc
gacatgtgtgctgcacctggctccaagacatttcagcttcttgagataattcatgaatca
gcagaaccaggatctctacctaatggaatggtggtggcgaatgatgtggattacaaaaga
tctaaccttcttattcaccaaactaagagaacgtgtacaaccaacttgatagtcaccaac
aatgaaggtcaacatttcccaaactgcaactcgatagcatctgagaagtgtcatcatccc
attgatcagcttctgtttgatcgtgtcttatgcgatgtaccctgtagtggtgatggcact
ctgcgcaaggctccagacatatggcgaagatggaactctggatcagggaatggacttcat
agtctacaagttgtgattgccatgagaggtttgtctctgctaaaagttggtgggagaatg
gtatactcaacctgctcaatgaacccaattgaagatgaagctgttgttgctcaaattctg
aggagatgtggaggctctgttgagcttgtagatgtctcagataagcttcctgaacttatc
cgaagaccaggtcttaagaaatggaaggtgcatgatagaggtggctggtatagatcttac
aaagatgttccaaaagtgcagagagacggagttcttagaagcatgttcccttctggtaaa
agcgataaagactcaacaacaggagaaatagcttctgatgaatcagctgaggaagtctgt
aatcttcctcttgaacgttgtgtgaggatagtgcctcatgatcagaacactggggggttc
tttatcgcagtgcttcacaaagtttcatctctaccagattttcaggagaagagaaggtat
accagaggcagaaactcatctgagaaaacttcatatgaagaagtctctgacactgtgatt
actactcagcctgaagagaataaagaggagatagttgtagaagaagaagcagcttcagac
aatggcttgaagcttgagaaggaaaccaccagcaaagaaggcactgtagaattgggtaaa
gaagtgccaccaccagtgaaagggaagtggaaaggacttgaccctgttgttttcttgaga
gatgaaacagtgatcgacgggatcaagagattctacggcatcaacgatgagtcttttcct
ctcaacggccatctcgtgactagaaacagcgacacgagcaccaaaggcaacgtgaagagg
atttactatgtttcaagatcggttaaggatgttctcgagcttaaccttgcggtaggggag
aagattaaggtcgcatctgttggcctcaagatgtttgagaaacaatcagcgagagaatgt
gaagctggctcttgctcattccggataacatcagagggattgcatgtgatccttccctac
atgaccaagcagttactttacgcaacaatggtggatttcaagaatctcctgcaatacaaa
tctatcaagttcacagattttgttcatccacagtttggccagaaagcagcagaagtagcc
gagggatactgcgttgttattcttgttgatggtgctcagaaggacgggtctgaagcagtc
aaagtgaattcatcaacaatagccattggatgctggaaggggaaagcgagcttaacagtt
atggtaacaacagtggactgcgaccaacttatccagaaacttgcttgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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