KEGG   Brassica oleracea (wild cabbage): 106298316
Entry
106298316         CDS       T04124                                 
Name
(RefSeq) TATA-box-binding protein 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106298316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:boe03000]
    106298316
   03021 Transcription machinery [BR:boe03021]
    106298316
Transcription factors [BR:boe03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    106298316
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     106298316
  RNA polymerase III system
    TFIIIB
     106298316
  RNA polymerase I system
    SL1/TIF-1B
     106298316
SSDB
Motif
Pfam: TBP DUF3378 DUF4295 Beta-Casp
Other DBs
NCBI-GeneID: 106298316
NCBI-ProteinID: XP_013589872
UniProt: A0A0D3CSF2
Position
C6:complement(14292246..14294722)
AA seq 200 aa
MAEQGMEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKMREE
TYTAFENIYPVLTEFRKIQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggctgaacaaggaatggaagggagccagccagttgaccttagcaagcatccttcaggg
atcgttccaactcttcaaaacattgtatcgacagtgaacttggactgcaagcttgatctt
aaagccattgctttgcaggctcgtaatgctgaatataaccccaagcgttttgctgcggta
atcatgaggataagagagccaaagaccacagcgttgatctttgcgtctgggaaaatggtg
tgtactggagctaagagtgaacatctttcgaagctggctgcgagaaagtacgctcggatt
gttcaaaagcttggctttcctgcaaagtttaaggatttcaagatacagaacattgtaggg
tcttgtgatgtcaaattccccatcaggcttgaaggtcttgcatactctcacagtgctttc
tcaagttacgagcctgaactattcccaggactgatatataggatgaaacaaccaaagatt
gtactccttatttttgtgtctggaaagattgttataaccggagccaagatgagagaagag
acttacaccgcctttgagaatatctacccagttcttacagaattcaggaaaatccagcaa
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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