KEGG   Brassica oleracea (wild cabbage): 106298435
Entry
106298435         CDS       T04124                                 
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
  KO
K03504  DNA polymerase delta subunit 3
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03030  DNA replication
boe03410  Base excision repair
boe03420  Nucleotide excision repair
boe03430  Mismatch repair
boe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106298435
   03410 Base excision repair
    106298435
   03420 Nucleotide excision repair
    106298435
   03430 Mismatch repair
    106298435
   03440 Homologous recombination
    106298435
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:boe01009]
    106298435
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:boe03032]
    106298435
   03400 DNA repair and recombination proteins [BR:boe03400]
    106298435
Protein phosphatases and associated proteins [BR:boe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106298435
DNA replication proteins [BR:boe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    106298435
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      106298435
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     106298435
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 106298435
NCBI-ProteinID: XP_013590015
Position
C6:38971781..38974282
AA seq 484 aa
MTHTETLNILDELESLVSDQLQVVSYKWLSRNFSISSKTAKSLLKDFVEKNGKGFEVVYI
VSGWLKNTPSDHRTRLVSSSKLSEVEKEFNGTHSVSIYSVQASIPMEPAAIWNSEFVQAE
ELFREPSAADNCLRDNRFCGISNSFVKRNIEGATANVTAPGTASVRTTVPSIPKVGYQAK
NETVTTAPAQKQPAKSSNDKEKSLPVPATKKNGQAQKSVTGTGGSLKNMWGRVPVKAEDT
SATIEVKNHDDSEAQKPSHGAEHKGGSDDEAPDVSIRNRKRKVIFDFSDEECEDVISLAS
PSSPKINPGPDSEETKDSGPENPDKRVSGPDEPEVSGEDWQKTTSADTSGVKKEEKPIAS
SKEKMQGNGSEAGVNPSKGRMTNAPSSPKRKKVLKTRIDERGREVTEVVWEDTETNTKKK
EDSDTSKKLNDGKSANAAVNRAVVQKKSPAMGAVNAGGKTGSKKGGNVKDPKQGNIMSFF
KKKV
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgacacacaccgaaaccctaaatatcctcgacgaactcgagtctctcgtctccgatcag
cttcaagtggtatcttacaaatggctgagtcgaaatttctctatttcatcaaaaactgcc
aagagcttgcttaaggatttcgtcgagaaaaatgggaaaggtttcgaagttgtttatatt
gtgtctgggtggctaaagaacactccttctgatcaccgcacaaggcttgtatctagttca
aaactttcagaagtggagaaagagttcaatggaactcactcagtttctatatacagtgtt
caagctagtattccgatggagccagcagctatatggaacagtgagtttgtgcaagcagaa
gaactcttcagggagccttctgccgctgataattgcttgagagacaacaggttttgtggc
atctccaattcttttgtaaagcgtaatatagagggagccactgcaaatgttacagccccg
ggaactgcaagtgtgagaactacagtgccttcaatccctaaggttggctatcaggctaaa
aatgaaactgttactactgctccagctcaaaaacagcctgcgaaatcctccaatgataaa
gaaaaatcccttcctgtgcccgctactaaaaagaacggtcaagcccaaaagagcgttact
ggaacagggggttcgttgaaaaatatgtggggccgtgtgcctgtgaaagcagaagataca
tctgcaacaatagaggtcaaaaaccatgatgactcagaagcccaaaagccttctcacggt
gcggagcacaagggaggcagcgatgatgaggccccagatgtcagtatcaggaacagaaaa
aggaaggtgatatttgatttttctgatgaagagtgtgaagatgttatcagcttagcatct
cctagcagtcctaagattaatccgggtccagatagcgaagaaaccaaagattcaggtccg
gaaaatcctgataaacgtgtatctggaccagatgaaccagaggtcagcggagaagactgg
caaaaaactacctctgctgatacttccggtgtcaaaaaagaggagaaacctattgcttca
tcaaaggagaagatgcagggaaatggttctgaagctggagtcaatccgtcaaagggaaga
atgactaatgctcctagttcaccgaaaaggaaaaaagtgttgaagacgaggattgatgag
cgtgggagagaagtaactgaggtagtctgggaggatacagaaacaaacacaaagaagaaa
gaagacagtgatacgagtaagaagttaaatgatggcaaaagcgcaaatgctgctgttaac
agggctgttgttcagaagaagagcccggccatgggagctgtaaacgcaggagggaaaaca
ggaagcaagaaaggagggaacgtgaaagatccaaagcaagggaacataatgtctttcttc
aagaagaaagtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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