KEGG   Brassica oleracea (wild cabbage): 106318585
Entry
106318585         CDS       T04124                                 
Name
(RefSeq) THO complex subunit 4B-like
  KO
K12881  THO complex subunit 4
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03013  Nucleocytoplasmic transport
boe03015  mRNA surveillance pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106318585
  09122 Translation
   03013 Nucleocytoplasmic transport
    106318585
   03015 mRNA surveillance pathway
    106318585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106318585
   03041 Spliceosome [BR:boe03041]
    106318585
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106318585
    TREX complex
     106318585
Spliceosome [BR:boe03041]
 Complex C
  Other components
   EJC/TREX
    106318585
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106318585
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 106318585
NCBI-ProteinID: XP_013612080
UniProt: A0A0D3EIB2
Position
C9:54260345..54261878
AA seq 281 aa
MAGGLDMSLDDLIKSNRKPTGSRGRGNGGSSRFGGGSGPSRRFSNRVGNRTAPYSRPLQQ
QQAQDPMWQNDVFATDESVAAAFGHQSGGFGSVVGGSSIETGTKLYISNLDYGVSNEDIK
ELFSEVGDLKRYGLHYDKSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIVGT
NLSAPTPTTPLAPVQFPFPSNGILGNFNENYNGGFNGNFRGRGGFTGRPRGGLGGGNFRG
GRGGRGGRGGRGSGRGRDEKVSAEDLDAELDKYHKAAMETS
NT seq 846 nt   +upstreamnt  +downstreamnt
atggcaggtggcttggatatgtcacttgatgatctcatcaaatctaatcgaaaacccacg
ggatctcgcggccgaggcaacggtggttctagtagattcggcggtggctccggtccgtct
cgacgattttctaacagagtagggaacagaacggcgccgtattcaaggccgttacaacaa
cagcaagctcaagacccaatgtggcaaaacgacgttttcgctactgatgagagtgtggcg
gcggcttttgggcatcagtctggaggctttggaagcgtcgtcggaggatcttcaatcgag
actgggacgaagctctacatctccaatttagactatggtgtctccaacgaggatatcaag
gagctcttctcagaggttggtgaccttaagcgttatggtcttcactatgataagagtgga
agatccaagggtactgctgaggttgttttttcacggcgtggtgatgccttggctgctgtc
aagcgttacaacaatgttcagttggatgggaagctgatgaagattgagatcgttggaaca
aatctttctgctccaacgcctactacacctcttgctccagttcagtttccctttccttcg
aatgggatacttggcaacttcaatgagaactacaatggaggcttcaatgggaacttcagg
ggaagaggtggttttacggggcggcctcgtggtggtttaggcggtggtaatttccgaggt
ggtagaggaggcaggggaggtagaggaggccgtggcagtggaagaggacgtgatgaaaag
gtatctgcagaggatcttgatgctgaattggacaagtatcacaaagcagcaatggaaaca
agctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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