KEGG   Brassica oleracea (wild cabbage): 106334822
Entry
106334822         CDS       T04124                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIB-2
  KO
K03124  transcription initiation factor TFIIB
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106334822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106334822
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     106334822
 Prokaryotic type
  Archaeal type
    TFB
     106334822
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Ribosomal_S27e Cyclin_N zf-ribbon_3 Zn-ribbon_8
Other DBs
NCBI-GeneID: 106334822
NCBI-ProteinID: XP_013628652
Position
C3:24068523..24070949
AA seq 316 aa
MSDAFCSDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVIXLTKKICSVAN
GATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVKK
SEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLPKII
PAWYAKEEDLKNLQSP
NT seq 951 nt   +upstreamnt  +downstreamnt
atgagcgacgcgttttgctcggactgcaagaaacacacggaggtcgtgttcgatcactcc
gccggagacaccgtctgctcggagtgcggcctcgtgctcgagtctcactcaatcgacgaa
acctccgagtggcgcaccttcgctaacgagtcgggcgataacgatcccgtccgcgtcggc
ggtccgacgaacccgcttctcgccgacggtggtctcaccaccgtcatttcgaaacctaac
ggatcgtccggggactttctctcgtcttcgcttggtcgttggcagaaccgtggatcgaac
cctgatcgcgggcttatcgtcgcgttcaagacgatcgctactatggctgataggttgggg
cttgtggcgaccatcaaggaccgagccaatgagatatataaaagggtagaggatcagaag
tcaagcagaggaaggaatcaggatgctcttttggctgcttgtttatacattgcttgtcgt
caagaggacaagccacgaactgtcatatagttaacaaagaaaatatgttctgttgccaat
ggagctactaagaaggagattggtcgtgcaaaagagtacatagtcaaacagttggggctt
gaaacaggacaatcagtagaaatgggaactatccacgctggagattttatgagacgtttt
tgctccaatcttggtatgactaaccaaaccgtgaaggcggctcaagaatctgtgaagaag
tcagaggagtttgatataaggaggagtcccatatcgattgcagcagcggttatatacatc
ataacacagctctctgatgagaagaagcctcttcgagatatctcggtggcaactggagtt
gcagaaggaactattaggaactcgtacaaagatctctaccctcaccttcccaagatcata
ccagcttggtacgctaaagaagaagatctcaagaaccttcaaagcccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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