KEGG   Brassica oleracea (wild cabbage): 106335359
Entry
106335359         CDS       T04124                                 
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:boe00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    106335359
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:boe04040]
    106335359
Ion channels [BR:boe04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   106335359
SSDB
Motif
Pfam: Ion_trans cNMP_binding Ion_trans_2
Other DBs
NCBI-GeneID: 106335359
NCBI-ProteinID: XP_013629319
Position
C3:27392657..27413178
AA seq 674 aa
MASPMENDDVPMLPASDTSSSSRTMPFTSRSRSTSLANNSSTIDVFNSSTVVLGYTNHLG
TQRRPPLVQMSDPLSSTRSPEPRFALPPPSTGASSDSVGASSSQPNERNHAYSRTPRVFA
TSDFTLHNALDDDAKGWAKYFSGIIYPESNFVQIWTTFFALSCLCSIFVDPLFFYPIEIY
KEERCIKIDWWTTNVFVIVRSITDGLYALNIVLQFRLAYVDLESTVVGAGQLVDDPKKIA
SHYLRGKFLTDFFIVLPIPQILLLWIIPQLLGTSGANNTKNYLRAAILVQYIPKLRRLFP
LLAGQTPRGFRFDSALAKFFINLLTFMLAGHVIGSCWYLLGLQRVNQCLRDACGNSSFEC
KQLIDCGRENRTEVLHAWKINVSANACFQEDGFDYGIYLKAVNLTSNCTRWYRRYSYSLF
WGFQQISTLAGNQVPSYFFGEVLFTMCIIGLGLFLFALLIGNMQNFLQSLGRRDTEMTVR
RRDVEQWMSHRRFPKDIRKRVREVERLNWNATRGVNEELLFENMPDDLQRDIRRHLFAFL
KKVRIFSEIDESILDAMRARLKQRTYLKNNKVLHRGGVVKKMVFILRGKMESIGEDGYRI
LLSEGDVCGEELLTWCQERSSVNPDGTMIRMPSKGLLSSRDVWCVTNVEAFSLSVADLED
ITSLFPNLEIPKEP
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggcttctcccatggagaacgatgatgttcccatgcttccagcttcagacacatcatca
tcatctcgtactatgcctttcacttccaggtcacgtagcacttcccttgcaaacaattct
tccaccattgacgtattcaacagctcgacagttgttttaggctacacaaatcatcttgga
acccagagacggcctccgttagtgcaaatgagtgaccctctttcctctactcgcagtcct
gagcctcgctttgctcttcctcctccttctactggtgcttcttctgattccgttggtgcc
tcctcctctcagcctaatgagaggaatcatgcctacagccgcactcccagagtttttgcc
acttctgatttcacgctccataacgctcttgatgatgatgctaaaggctgggctaaatac
ttttctggaatcatatatcctgagtctaatttcgttcagatctggactacattctttgcc
ttatcatgcttgtgttctattttcgtagatcccctctttttctaccccatagaaatatat
aaggaggagagatgcattaagatcgactggtggacgactaatgtatttgtaattgtgaga
agtataacggatggcttatacgctttgaacatcgtgcttcagttccgattggcatatgta
gatcttgagtctacggttgttggtgctggccagttggttgatgatccaaaaaaaattgct
agccattacttacgaggaaaatttttgacagactttttcatagtgttgccaattccacag
atattgctattatggataataccacaactgttaggcacatctggggcaaacaatacaaag
aactatttacgtgctgcaattcttgtccaatacattccaaaattacgtaggctttttcct
cttctagccggacaaacaccaagagggttcagatttgattcggcattggccaagtttttt
ataaatcttctcaccttcatgcttgctggtcatgttattggctcttgctggtatcttttg
ggtctgcagagagttaatcagtgccttcgagatgcttgcggaaattctagttttgaatgt
aaacaactaatagattgtggtcgtgaaaacagaacggaagttttacatgcatggaaaatt
aacgttagtgccaatgcttgttttcaagaggatggttttgattatggaatctatttgaag
gcagtcaatctcactagtaattgtactcgttggtacagaagatacagttactctcttttc
tggggatttcagcaaatcagcacgcttgctggaaaccaagtcccaagttacttttttggg
gaggtcttatttactatgtgtatcatcggactggggcttttccttttcgcgcttcttatc
ggtaatatgcaaaacttccttcagtctctcggccgaagggatacagaaatgactgtaaga
cggcgagatgtggagcaatggatgagccatagacggtttccaaaagacataagaaagaga
gtgcgagaggttgagaggctcaactggaatgctactagaggagttaacgaagaattgctc
tttgagaatatgcctgatgaccttcagagagatataagacgtcatctcttcgcatttctc
aagaaggtgaggatattttcggagattgatgaatctatcttagatgccatgcgtgcgagg
ctgaaacagaggacttacttaaagaataacaaggtcttgcaccgcggaggtgtagttaag
aaaatggtattcatattgagaggtaagatggagagcattggagaagacggttatcgaatt
cttttatcagagggagacgtttgtggtgaagaacttctcacttggtgccaagaacgctct
tctgtaaacccagatgggactatgataaggatgccatcaaagggactgcttagcagcaga
gatgtttggtgtgtgacaaacgtggaggcgttttcactcagtgtagcagatcttgaagac
atcacgagcttgttccccaatctcgagattcctaaggagccataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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