KEGG   Brassica oleracea (wild cabbage): 106337451
Entry
106337451         CDS       T04124                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINAT1 isoform X1
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106337451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:boe04121]
    106337451
Enzymes [BR:boe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106337451
Ubiquitin system [BR:boe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    106337451
SSDB
Motif
Pfam: Sina_ZnF Sina_TRAF Sina_RING zf-C3HC4_3 zf-C3HC4_2 zf-Di19 zf-RING_6 Prok-RING_4 zf-RING_UBOX
Other DBs
NCBI-GeneID: 106337451
NCBI-ProteinID: XP_013632010
Position
C4:complement(51723858..51726477)
AA seq 268 aa
MLSKKPLESNSTGLDYEVKMSKVEANNKPARSGNASIGKHGLHSSNGVYELLECLVCTNL
MYPPIYQCPNGHTLCSNCKLKVHNTCPICRYELGNIRCLALEKVAESLEVPCRYQKLGCH
DIFPYYSKLKHEQHCRFRSYNCPYAGSECSVTGDIQTLVDHLKDDHKVDMHDGCTFNHRY
VKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGDEKEAKKFSYSL
EVGAHSRKLTWQGIPRSIRDSHRKVRDS
NT seq 807 nt   +upstreamnt  +downstreamnt
atgctttcaaagaagcccctagaatccaactcaacaggcttagattatgaggttaagatg
tctaaagtggaagctaacaacaaaccagcaagatcaggtaatgcctccattggaaaacat
ggactccattcaagcaatggtgtctatgagctcctcgaatgtctagtttgtacaaatctt
atgtatcctccaatttatcagtgccctaatggccacacactgtgctcaaactgcaaactg
aaagtgcacaacacgtgccctatatgccgctacgagctcggcaacataagatgcttggcg
ctcgagaaagttgcggaatctttagaagttccatgccggtaccaaaagttagggtgtcac
gacattttcccgtactacagcaagctcaagcacgagcagcactgcaggtttcgatcatac
aactgtccctacgctggctccgagtgttcggtgaccggtgatattcaaacccttgttgac
catctcaaagatgatcataaagtcgatatgcatgatggttgcactttcaaccaccgttat
gtcaagtcgaatccacacgaggttgagaatgctacgtggatgcttacggttttcaactgt
tttggaagacagttctgcttacactttgaggcatttcagcttgggacggcaccagtgtac
atggcgtttctaaggttcatgggagacgagaaggaggctaagaagtttagttacagcttg
gaagttggagctcacagccgtaaactgacgtggcaagggattccgagaagcatcagagac
agtcacaggaaagtcagagatagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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