KEGG   Bosea sp. PAMC 26642: AXW83_06835
Entry
AXW83_06835       CDS       T04264                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bop  Bosea sp. PAMC 26642
Pathway
bop03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AXW83_06835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bop03019]
    AXW83_06835
Messenger RNA biogenesis [BR:bop03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AXW83_06835
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: AMJ63505
UniProt: A0A126P304
Position
1457567..1459237
AA seq 556 aa
MTRSSDQLVFVPLGGLGEIGMNAALYGFGPEGRRKWILVDCGLSFAGPEAPGVDIVLPDL
RYIIEERANLLGIVITHAHEDHIGALAALWPSLRAPVYCTKFAAGLLATRRLSEPGAPKV
PMHVVAQGGRVTLGPFDIEFVPVAHSIPESNALAIRTPVGLVVHTGDWKIDPTPQVGLPT
DEKRLRELGDEGVIAMICDSTNVMRDGTSPSEADVAAKIKELVHSAPGRVAVTTFASNVA
RLRAVAEAAMADQREVVVVGRAMDRVIDVARECGYLDGIPAFRSADTYGYLPRDKVVCLL
TGSQGEPRAALSRIAGDDHPEIALSPGDRVIFSSRTIPGNEKAVGNILNALARDNIEIIT
DRTHLVHVSGHPRREEMARLYGWLRPKIAIPAHGEDLHLSEHATFARGLGVKTVMRAVNG
DVIAITADGASKIDEVTHGRLYQDGNLLVNSLEKTIAERRKLSFAGMISVAVAIDEKGGL
AGDPEIAVLGLPPRTRDGTDFDEYVADAVSELIDGIPKARRRDPEALRNALERGLRSAVN
EEWGKKPLVHALVIEV
NT seq 1671 nt   +upstreamnt  +downstreamnt
gtgacccgttccagcgaccagctcgtcttcgttcccctcggcggcctcggcgagatcggc
atgaatgccgccctctacggtttcggcccggaaggccgtcgcaaatggatcctggtcgat
tgcgggttgtccttcgccggccccgaggcgcccggcgtcgatatcgtgctgcccgatctg
cgctacatcatcgaggagcgggcgaacctgctgggcatcgtcatcacccacgcccatgag
gaccatatcggcgcgcttgcggcgctctggccctcgcttcgcgcgccggtctactgcacc
aaattcgccgcaggcctgctggcgacgcgacgcctgtcggagccgggcgcgccaaaggtg
ccgatgcatgtcgtggcgcagggcgggcgcgtcacgctcggccccttcgacatcgaattc
gtccccgtcgcccattcgatcccggaatcgaacgcgctcgccatccgcactccggtcggc
cttgtcgtccacaccggcgactggaagatcgacccgacgccgcaggtcggactgccgacc
gatgagaaacgcttgcgcgaactcggcgacgagggcgtgatcgccatgatctgcgactcg
accaacgtcatgcgcgacggcaccagcccgagcgaggccgatgtcgcagccaagatcaag
gaactggttcattcggcaccgggccgtgtcgccgtcaccaccttcgcctccaacgtcgcc
cgcctgcgcgccgtcgcggaagcagccatggccgaccagcgcgaggtcgtcgtcgtcggc
cgcgccatggaccgcgtcatcgatgtcgcgcgcgaatgcggctatctcgacggcatcccg
gccttccgctcggccgacacctatggctacctgccgcgcgacaaggtcgtgtgcctgctc
accggcagccagggcgagccgcgcgccgcactttcccgcatcgcgggggacgaccacccc
gagattgctctgtctccgggcgaccgcgtgatcttctcgtcgcgtaccattccgggcaac
gagaaggccgtcggcaacatcctgaacgcgctcgcccgcgataacatcgagatcatcacc
gaccgcacccatctggttcatgtctccggccacccgcgccgcgaggagatggccaggctc
tatggctggctcaggccgaagatcgccatcccggcccatggcgaggatctgcatctttcc
gagcacgcgaccttcgcgcgtggtctcggcgtcaagaccgtgatgcgcgccgtcaatggc
gacgtcatcgcgatcacggccgacggtgccagcaagatcgacgaggtcacccatggcagg
ctctatcaggacggcaacctgctggtgaattcgctggaaaagaccatcgctgaacgccgc
aagctctccttcgccggcatgatctcggttgcggtcgcgatcgacgagaagggcgggctc
gctggcgaccctgagatcgcggtgctcggcctgccgccgcgtacccgcgacggcacggat
ttcgacgagtacgtcgccgacgccgtctccgaactgatcgacggcatccccaaggcgcgc
cggcgtgaccccgaagccctgcgcaacgcgctggagcgcggcctacgcagcgccgtcaac
gaggagtggggcaagaagccgctggtgcacgcgctggtgatcgaggtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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