KEGG   Bordetella pertussis CS: BPTD_0554
Entry
BPTD_0554         CDS       T01846                                 
Name
(GenBank) hypothetical protein
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
bpc  Bordetella pertussis CS
Brite
KEGG Orthology (KO) [BR:bpc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bpc03009]
    BPTD_0554
Enzymes [BR:bpc01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     BPTD_0554
Ribosome biogenesis [BR:bpc03009]
 Prokaryotic type
  ribosomal protein modification factors
   BPTD_0554
SSDB
Motif
Pfam: TRAM_2 Radical_SAM UPF0004 CLP1_P TRAM
Other DBs
NCBI-ProteinID: AEE66013
Position
576963..578282
AA seq 439 aa
MSSPKVGFVSLGCPKALVDSERILTQLRTEGYEVTPEYNDADVVVVNTCGFIDSAKAESL
EAIGEAIAENGKVIVTGCMGVEESVIRQVHPSVLAVTGPQQYEEVVRAVHGVAPPRQDHN
PYLDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLSEAERLVR
AGVKELLVISQDTSAYGVDIKYRSGFWNGRPVKTRMTELCAALSELGVWTRLHYVYPYPH
VDEVIGLMADGKVLPYLDIPFQHASPRILRAMKRPAFEDKTLARIKRWREECPDLTLRST
FIVGFPGETEEDFQYLLDWMSEAQLDRVGCFQYSPVEGAPANTLDNPVPDEVKQERWERF
MEHQQAISTARLSTRVGREIDVLIDSVDEEGAVGRSSADAPEIDGCVYVDSEQPLKAGDM
VRVRVTDSDEYDLWGERIA
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgtcttcccccaaagtcggcttcgtcagcctcggctgtcccaaggccctggtcgattcc
gaacgcatcctgacccagcttcgcaccgaaggctacgaggtcacgcccgaatacaacgac
gccgatgtcgtggtggtcaacacctgtggcttcatcgacagcgccaaggccgaatcgctc
gaagcgatcggcgaggcgatcgccgagaacggcaaggtcatcgtgaccggctgcatgggc
gtggaagaatccgtcatccggcaggtgcatcccagcgtgctggccgtgaccggaccgcag
cagtacgaggaagtggtgcgcgcggtgcacggcgtggcgccgccccgccaggaccacaac
ccatacctggacctggtcccgccgcaaggcgtcaagctgacgccgcgccattatgcctac
ctgaagatttccgaaggctgcaaccatcgctgcagcttctgcatcattccctccatgcgc
ggcgacctggtgagccggccggtgggcgacgtgctcagcgaggccgagcggctggtgcgg
gccggcgtcaaggaactgctggtcatctcgcaggacaccagcgcctatggcgtggacatc
aagtaccgcagcggtttctggaatgggcggccggtcaagacgcgcatgaccgagctgtgc
gccgcgctgtccgagctgggcgtgtggacccgcctgcattacgtctatccgtatccgcac
gtggacgaagtgatcggcctgatggccgacggcaaggtgctgccctatctggacatcccg
ttccagcatgccagcccgcgcatcctgcgcgccatgaagcgcccggcgttcgaggacaag
acgctggcgcgcatcaagcgctggcgcgaagagtgccccgacctgacgctgcgctcgacc
ttcatcgtgggctttccgggcgagaccgaggaagacttccagtacctgctggactggatg
agcgaagcccagctcgaccgcgtcggctgtttccagtactcgccggtcgaaggcgcgccg
gccaacacgctcgacaatcccgtgccggacgaggtcaagcaggagcgctgggagcgcttc
atggaacaccagcaagccatctccaccgcgcgcctgagcacgcgggtaggccgggagatc
gacgtgctgatcgacagcgtggacgaagaaggcgcggtcggccgctccagcgccgacgcg
ccggagatcgacggctgcgtctacgtcgacagcgagcagccgctgaaggccggcgacatg
gtgcgggtgcgcgtcaccgactccgacgagtacgacctctggggcgagcggatcgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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