KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169667
Entry
110169667         CDS       T05002                                 
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpec03041]
    110169667 (usb1)
Spliceosome [BR:bpec03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    110169667 (usb1)
SSDB
Motif
Pfam: HVSL
Other DBs
NCBI-GeneID: 110169667
NCBI-ProteinID: XP_020790903
Position
Unknown
AA seq 271 aa
MLVVYSSSSEEEEGGSSVNTRCLEDGEKSYPEKKRLKIEQLSTKTKLPVPHCVLNMFPEE
LDPQTEDSSLHGGRIRSFKHEQGNWATYVYLPYDPELEFTDILQELVSVAKRHGIDLTPQ
EEFHLSLSQTVVLRHHWIQPFTQNLKAGLAHCRRFMCTAERLKVYCNAEKTRTFIGVEVS
AGTNQLLDIIKVVDKTMTDFRLDTFYKNPSFHISLAWCIGDSTAQLKSFLKELQSIMDKQ
EDGPYTLSLNCVELRCRTGNKVFRFPLSSEN
NT seq 816 nt   +upstreamnt  +downstreamnt
atgctagtcgtctacagcagcagctcagaagaggaagaagggggctcttcagtaaataca
agatgcctggaagatggtgaaaaatcatatccagaaaaaaagagacttaaaatagaacaa
ctgtcaacaaaaactaaattgcctgtcccgcattgtgtcttgaacatgtttcctgaagag
ttggatccacagactgaagacagttcactccatggtggacgtatccgctcttttaaacac
gaacaggggaactgggcgacatatgtttatttgccctacgatcctgagttggagttcact
gacatactgcaggagcttgtgtcagtagcaaaacgccatgggatagacttgacgcctcag
gaggagtttcatctgagtctttcacagacagtggtattgagacatcactggattcaacca
ttcacacaaaacctcaaggcaggcctagcacactgtagaaggttcatgtgcaccgcagaa
aggctaaaagtctattgtaatgctgagaagacaagaacatttattggtgttgaagtgtca
gcagggactaatcaactattggacattattaaagtagtggacaaaacaatgacagatttt
agattggatactttttataaaaatccttctttccatataagtctggcctggtgtattgga
gactcaacagcacaactgaaaagctttctgaaagaacttcagagcataatggacaaacaa
gaagatggtccatataccctaagtttgaactgtgtggaacttcgatgccggacaggaaat
aaagttttccgctttccattgagttctgaaaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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