KEGG   Bordetella pertussis 137: Q425_14170
Entry
Q425_14170        CDS       T03754                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bpeu  Bordetella pertussis 137
Pathway
bpeu03030  DNA replication
bpeu03430  Mismatch repair
bpeu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpeu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q425_14170 (dnaX)
   03430 Mismatch repair
    Q425_14170 (dnaX)
   03440 Homologous recombination
    Q425_14170 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpeu03032]
    Q425_14170 (dnaX)
   03400 DNA repair and recombination proteins [BR:bpeu03400]
    Q425_14170 (dnaX)
Enzymes [BR:bpeu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Q425_14170 (dnaX)
DNA replication proteins [BR:bpeu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Q425_14170 (dnaX)
DNA repair and recombination proteins [BR:bpeu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Q425_14170 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_16 DNA_pol3_tau_5 AAA_14 AAA_18 AAA_2 AAA_5 TsaE AAA_30 nSTAND3 AAA_19 PIF1 AAA_28 Rad17 T2SSE
Other DBs
NCBI-ProteinID: AJB26143
Position
1469268..1471358
AA seq 696 aa
MTYLVLARKWRPRSFDTLIGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAK
SLNCENGITSKPCGQCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
DAIVGHLQAVLGEEQIGFEVPALRLIGQAAGGSMRDALSLTDQAIAYSAGNLSEEAVRGM
LGTIDQRHLVRLLDALASGDAAGVLAVADELAVRGLSYAGALADLAVLLSRVAIEQRVRG
ALPQDDPLTEDITRLAAALHPDAVQLFYSVAVHSRGELTLSPDEYAGFVMACLRMLALNG
EAGPATAVQAPRADTTPRAAAPAAAAPAETRPEPTPAPALAPQAAAAPRAVARSESKPQP
APEPEPEPEPAPRPAATPVAATPPAVAEPEPVAAPAAQARAAEPAPAPVPPWEDLPEAVA
APAPAQPAAAPAPVAADDDGPPAWVDEAIPDEAGGGFVPEHSFTADPDDEFETLAPAAAA
MPAPRAPTPRRESGGRGRAARSRLADMSPTGWPELAARLPVTGLAAELARQSEWAGVQGD
AVLLRVAVRTLAESESRVRLQTVLCEHFGQGLRLEIEVGVTGDGTAHAVAQIERAARQQA
AEDAVAVDPFVQALVADFGGRVVPGSIRHVDNPPAA
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgacttatctggtactggcccgcaagtggcgcccgcgatccttcgataccctgatcggg
caggatcacgtggtgcgagccctcacgcacgcgctggacacgcagcgcctgcatcatgcc
tggctgttcaccggtacgcgcggggtcggcaagaccaccctgtcgcgcatcctggccaag
tcgctcaattgcgagaacggcatcacgtccaagccttgcggccaatgccgcgcctgcacc
gaaatcgatgcgggccgcttcgtcgactacctcgagctcgatgccgcctccaaccgcggc
gtcgaggaaatgacccagctgctcgagcaggcggtctacgcgccgggggccggccgcttc
aaggtctacatgatcgacgaagtgcacatgctgaccgggcatgccttcaacgccatgctc
aagacgctggaagagccgccgccgcacgtcaagttcatcctggcgaccaccgatccgcag
aaaatcccggtcacggtgttgtcgcgctgcctgcagttcaatctcaagcagatgccgccc
gacgcgatcgtggggcatctgcaggcagtgctgggcgaagagcagatcggcttcgaagtg
ccggcgctgcgcctgatcggccaggcggccggcggttccatgcgcgacgcgctgtcgctg
accgaccaggccattgcctatagcgccggcaatctcagcgaagaagcggtgcgcggcatg
ctgggcacgatcgaccagcgccatctggtacgcctgctggatgcgctggcctcgggcgac
gccgccggggtgctggcggtggccgatgagctggcggtgcgcggcctgtcgtatgccggc
gcgctggccgacctggcggtgctgttgtcgcgggtggccatcgagcagcgcgtgcgcggc
gccttgccgcaggacgatccgctgaccgaggacattacgcgcctggccgccgccctgcat
cccgatgcggtgcaactgttctattcggtggccgtgcacagccgtggcgagctgacgctg
tcgcccgacgagtatgccggtttcgtgatggcctgcctgcgcatgctggcgctcaatggc
gaggccggcccggcaacggccgtgcaggcgccgcgcgccgacacgacgccgcgggccgcg
gcgcccgccgccgcggcgccggccgaaacccggcccgaaccaacgcctgcgcccgcgctt
gcgccgcaggccgccgcggctccgcgcgccgtagcccgatccgaatcaaagccgcagccc
gcgcccgagcctgaacccgagcctgagccagcgccccggcccgcggccacgccggttgcg
gcgacgccgccggctgtcgccgaacccgaacccgtggcggcgccggcggcccaggcccgc
gccgccgagcccgcgccggcgccagtgccgccctgggaggacctgcccgaggccgtggcc
gcccccgcgccggcccagcccgcggccgcgccggcgccggtcgcggcggacgacgacggt
ccgccggcctgggtcgacgaggccattcccgacgaggctggcggcggcttcgtgcccgag
cacagcttcaccgccgatccggacgacgaattcgaaacgctggcgcccgctgccgcggcc
atgccggcgccacgggcgccgacgccgcgccgcgaatccggcggccgtggccgcgcggcg
cggtcgcgccttgcggacatgtcgccgaccggctggcccgagctggccgcgcgcttgccg
gtcaccggccttgccgccgaactggcgcgccagagcgagtgggccggtgtgcagggcgac
gcggtgttgttgcgcgtggccgtgcgcacgctggccgaaagcgaaagccgcgtgcgcctg
cagaccgtgctgtgcgaacatttcggccagggcctgcggctggagatcgaagtcggcgtc
accggagacggcaccgcgcatgcggtggcccagatcgaacgcgcggcgcgccagcaggcc
gccgaagacgcggtggcggtcgatcccttcgtgcaggcgctggtcgccgatttcggcggc
cgcgtcgtgcccggctcgatccgccatgtagacaatccgccggccgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (31)   

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