KEGG   Bathycoccus prasinos: Bathy13g01530
Entry
Bathy13g01530     CDS       T03089                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03030  DNA replication
bpg03410  Base excision repair
bpg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bathy13g01530
   03410 Base excision repair
    Bathy13g01530
   03420 Nucleotide excision repair
    Bathy13g01530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpg03032]
    Bathy13g01530
   03400 DNA repair and recombination proteins [BR:bpg03400]
    Bathy13g01530
Enzymes [BR:bpg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bathy13g01530
DNA replication proteins [BR:bpg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    Bathy13g01530
DNA repair and recombination proteins [BR:bpg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      Bathy13g01530
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 19012105
NCBI-ProteinID: XP_007509611
UniProt: K8EN84
Position
13:join(350639..351184,351304..358521)
AA seq 2587 aa
MYYKKNNKGANTYGEARRGKGQNQSRVLGASTASISPLEIAREEDHLEEELGYRVPGLNN
NGGAEGADAEDVQLGWLVNASAVRFSIRSIFFFFFFFVCVVFASAIEMRKSSPRGKIQKF
SNLYRKRADERARLIFYHHSRTTTHEREESAGLLIVSKSSSRFSCSSSSFTLFLFFFFVF
SVTTVECKQAQKPHAAVNLYFSCQDGSVFKVQKKYAPYFMLATSPGSEHEVEAYVRRKHK
EHVKEVELVDKEDLDLKNHLSGLKQTYLKISFYTQSGMYECRRELLPIVEKNKAKSNASV
AYQALHEQDALNAHENGGGNDAMQTDARGKRVFENSKKKTFTDYEDAMLDIREYDVPYHM
RYMIDSEVRCGHWYDVKVEIGDGDVIITHRPDLKRRAEVRVCAFDIETTKLPLKFPDAEF
DQVFMISYMLDGQGYLIINREVVSEDCDDFEYNPKPEYPGPFIVWNEPDEKALLRRWFDH
MRDAQPNVYVTYNGDYFDFPFIETRAKKHGMSMYREIGFRGSDSGETRSKFALHLDAFHW
VKRDSYLPAGSHGLKAVTKKLLKFNPIEVDPEDMLPFARSQPQTMAAYSVSDAVSTYYLY
MKYVHPFIFSLATIIPLTPDEVLRKGSGTLCESLLMVEAYRGNIVCPNKQRGAGEQHFNG
HPLESETYIGGHVECLQSGVFRSDIPVKFKLEPKGYQKLIDAVDDDLRYALEHEGKGATE
DDVENYKEIREGIVKKLEELRDNPNCEVNPLIYHLDVAAMYPNIILTNRLQPMANVNEDI
CASCDFNRPGKTCLREMEWTWRGEHYSATSSDYAQIKAQLQIERFPPLIPGEPKRFWKDL
SRQEQEIAKKTRLKMYSQKVYRKVMEKPVVETKKSSICMKENSFYIDTVRTFRDRRYEYK
GLNKQWKGRLSAAKQEGNPIETKEAADMVTLYDSLQLAHKCILNSFYGYVMRKGARWYSM
EMAGVVTLTGARIIQMAKQLVDDIGMPLELDTDGIWCCLPGTFPEEYTFEPNSDGSGKMK
KKLKVSYPCVVLNRMTDLLTRNDQYQTLVDPEKQIYKQSSEMSIEFEVDGPYRAMILPAS
KEEGVLIKKRYAVFNHDGSLEELKGFELKRRGELKLIKVFQSELFEDSGSSPFLGGQTLE
EVYKRVGDIANRLLDMLDTKGEEIDDEQLIDYISESSVMSKSLAEYGDRKSTSVTTARRL
AQFLEAPDLVKDKGLVCKYIISAKPHGAPTSQRAIPVSVFSSTPAVARKYLREWLKDAPP
GEAGEMPDLRDILDWEYYKGRLRGAVQKIISLPAALQNVKNPCPGVVHPDWLNKRIRELK
DKRKQIKLDSMTGFSRQTKDEYLEQLNFSEDEDEEDTRNEDNDNDDEHDMEDFGAARITP
ARGARVRVFQRHRDTGHHHGGPRTPPIGNMNLPAPDPNSDYASWLEHATKGWRIKRKEKR
ERKHREDLEDQRREREGLPRQKRRHSANDDSVIGQMDLFLENVDESLATSPWQIVSIDDY
SRGNAPSSLEDGGAEVEEPPAGVFRVWVVADGAMRSVLLSAPRKVYVATHHPDPEGDRGL
NGKKRVNVALPRAQNTNNFMTADGTSTLNVYEVEFDASKLSAVQYGRDVAALLADKNVVG
VYERDVPLEDWSIQTIGCVARVKREAANEILDDLKKTHKEGLKKKVQPMLEVSATNLDMK
TTTEVNYLPSMMDFTDDRALSSKGLLRHCSIYHAALDGKGVFAAHFPKRGGKGTSKGLLI
LLQPGGKSVREVDSEFVSEMFEGEKGRVDGNEEMEEDRDSEKCEWRVIYARTSAAAAKNL
NDAVSEFANASNGPSVVLLEAPPVGYGIPEFDDDDDAFASSCAGMNKNAKAAKRFEKVLT
ALKDSPILVVPFNSGDIEYLSEKGIAWQRDAAQLAAIRLAHTSKHLEKSIQISRYAHIPL
CNLDSDWSTHVLDTFFARRLRDEHQVLWSGKNGKPDYGGGSMDDQLSSTLTLESMESPRC
ELSKSGVYRSVCCELRVHHLVVCAIVNSHILNDLEQGALLGFDGGNATVADRGGHDASNA
FRTLRKMVAEMLRDASERGNEIADATLAQLRRWIFSSNSRMREPGLQHLVELCSRKVFTL
LISELNRLGADVVFADTRRVIVSTKKNSLASASAFITGLRNALGTRELFNWLELEPTKVW
HTLLFRGPHDFGGLAADETVLQKLFLNNGAGEAPMETENVPTDTQLDPHAVEGDEASLEM
HWNIATFLPEALSDHFKAIAGDFIVLPWKRERELGPDGRFGVAKEDKDVSAAQTDRIKAQ
LEAPDDLSDLELNEDDTNEENADSAAERRADADDGKENATPEQTKKESKYHADDANNQNL
ARNRLKVEEEKATWLCAQIDSHFTPKILQVARGFEKHASRSTHGATRLDKRYLFPENLPG
AHLPNHLRGNAALAFVKTVIAVLSLDDTIEDAVARCRKNALKLLSVPEFGPEARFREPCI
SFALRDVVCECCGDVRDLDLCRDPDLADGEWRCAECENRYDLQWIEMKLCDEVNARVRKA
QTQDLKCKRCTRIKVGHVQNRCPCGGLFETTSKPGALRDGLRVFRNVARWHEFDVLASVV
HFCENQT
NT seq 7764 nt   +upstreamnt  +downstreamnt
atgtattacaagaaaaacaacaaaggggcgaacacgtacggcgaagccagacgaggcaaa
ggccagaatcaatcccgtgtcctcggcgcgagcaccgcttccatctcgcctttggagatc
gcgagagaggaggaccatttggaggaggagttggggtaccgcgtgcccggtttgaacaac
aacggcggtgcagaaggtgcagacgcggaggacgtgcagctgggatggttggtcaacgcc
agcgcggtacgttttagtattcgtagtatcttcttcttcttcttcttctttgtctgcgtc
gtcttcgcgagcgcgatcgagatgcgaaagagcagcccgagagggaaaattcaaaaattt
tcaaacctgtaccgaaagagggcagatgagagagcgcgcttgattttttaccaccactct
cggacgacaacacacgagcgggaggagtctgccggtcttctcatcgtctcaaagtcgtct
tcgcgcttttcgtgttcttcttcgtcgtttacgctcttcttgttcttcttttttgtcttc
tcggttacgacggtggagtgcaaacaagcgcaaaagccgcacgcggcggtgaacttgtac
ttttcctgccaagacggttccgtgttcaaagtgcagaagaaatacgcgccgtattttatg
ctcgcgacttcgcccgggagcgagcacgaggtggaggcgtacgtgagaaggaaacataaa
gagcacgtgaaagaggtggagttagtggacaaggaagatttggatttgaaaaatcatctg
agcgggttgaagcagacgtatttgaagatttcgttttacacgcagagcggcatgtacgag
tgtcggagagagttgttgccaatcgtagagaagaacaaggcgaaatcgaacgcatcggtg
gcgtatcaggctttgcacgagcaggatgcgttaaatgcgcacgaaaatggcggtgggaac
gatgctatgcaaacagacgcgagagggaagagggtgtttgaaaattcgaaaaagaagacg
ttcacggattacgaagacgcgatgttggatatcagagagtacgacgtgccgtatcacatg
aggtatatgattgattccgaggtgaggtgtggacattggtacgacgtgaaagttgaaatt
ggtgatggagatgtaatcattacgcacaggccagatttgaagagaagagcggaagtgaga
gtgtgcgcgtttgatatcgagacgacgaaattgcctttgaagtttcccgacgccgagttt
gatcaagtgtttatgatttcgtacatgttggacgggcaaggctatttaattatcaatcgc
gaagttgtcagcgaagattgcgacgattttgaatacaatccgaaaccggaatatcctggg
ccgtttatcgtgtggaacgagccggacgagaaggcgctattgcgcagatggttcgatcac
atgcgcgacgcgcaaccgaacgtgtacgtgacgtataacggcgactatttcgatttccct
ttcattgaaacgagagcgaaaaaacacgggatgtccatgtaccgagaaattggctttcga
gggtcggattccggggagacgaggtcaaagtttgctttgcatttggacgcctttcactgg
gtgaagagagattcgtacttaccggctgggtcgcacggtttaaaagcagtcacgaagaag
ttgttgaaatttaaccccatcgaggtcgacccggaagatatgcttccatttgcgcgctcg
caaccgcaaactatggcggcatattcggtatctgatgccgtgtctacgtattatttgtac
atgaagtacgttcatcctttcatcttttcgttggcgacaatcattccgcttacgccagat
gaagttttacgaaaagggtctgggacgttgtgcgagtctttgctcatggttgaagcgtat
cggggaaacatcgtgtgcccgaacaagcaaagaggtgcgggcgaacagcatttcaacggc
catccgctggaaagcgagacgtacattggaggccacgtggagtgcttgcaatcgggcgtg
tttcgctcggacattccggtcaagttcaagctggaaccgaaagggtaccaaaaactcatc
gacgccgttgacgacgatttgaggtacgcgctggagcacgaaggtaaaggagcgacggaa
gatgacgtcgaaaactacaaagagattagagaaggcatcgtgaagaagctggaggaattg
cgcgataacccgaactgcgaggtgaatccgctgatttatcacttagacgtcgcggcgatg
tacccgaacatcatcttgaccaatcgattgcaaccgatggcgaacgtgaacgaagatatt
tgcgcgtcgtgtgattttaaccgtccaggtaaaacttgcttgagagaaatggagtggacg
tggagaggcgaacactactccgcgacgagctcggattacgcgcaaatcaaagcgcagttg
cagatcgaaaggtttccgccgctaattccgggcgaaccgaaacggttttggaaggatttg
agcagacaagagcaagaaatcgcaaagaagacgcgcttaaagatgtactcgcaaaaagtg
tacagaaaagtcatggagaagcccgtggtcgaaacgaaaaagagttcgatttgcatgaaa
gagaacagtttttacatcgataccgtgcgaacttttcgcgatcggagatacgagtataaa
gggttgaacaaacaatggaaaggaagactgtccgcggcgaaacaggaagggaaccctatc
gagacgaaagaggcggccgatatggtgacgttgtacgattccttacagctcgcgcacaag
tgtattttgaattctttttacgggtacgtcatgagaaaaggcgcgagatggtattctatg
gaaatggctggagttgtcacgctcactggcgcgcgcattatccaaatggcaaagcaactc
gtcgatgacattggtatgccgctcgagttggataccgacggtatctggtgttgtcttccg
ggtacgttcccggaggaatacacgttcgagccgaacagcgacgggtccggaaagatgaag
aaaaaattgaaggttagctatccgtgcgtcgttctcaaccgcatgaccgatttgctaacc
agaaacgatcaatatcaaacgctcgtcgacccagaaaagcaaatttacaagcaatcttcg
gagatgtccatcgagtttgaagttgacggtccgtacagggcgatgattttaccggcgtcg
aaagaagaaggcgtgctgattaagaagcgttacgcggttttcaatcacgacgggtcttta
gaggagttgaaaggcttcgaattgaaaagaagaggcgagttgaagttgatcaaggtgttt
caatccgaactttttgaagattccgggagttctccatttttaggagggcagacgctggaa
gaggtgtacaagagagtaggcgacatcgccaatcgacttctggacatgctcgacacgaaa
ggagaagaaattgacgacgaacaactcatcgattacatttcggaatcgagcgttatgagt
aaatcgttggcagaatacggcgataggaagtccacgtcggtgacgacggcgagaagactc
gcacaatttctcgaagcccctgatctcgtcaaggataaaggtttggtgtgcaaatacatc
atctcggcgaaacctcacggcgcgcctacttcgcaaagagccattccggtttccgtcttt
tcgagcacacctgcggtcgcgaggaaatatttgcgagagtggttgaaagatgctcctccg
ggagaagctggcgaaatgccagacttgcgcgatattctcgattgggagtattacaaaggt
cgtttgcgcggcgcggtgcagaaaattatctcccttccggcagctttgcaaaacgtcaag
aatccgtgtcccggcgtggtgcacccggattggttaaataagcgcattcgcgaactcaag
gataagcgcaagcagatcaaactcgattccatgacgggcttcagcagacagaccaaggat
gaatacctcgagcaattgaacttttcggaagacgaggacgaagaagatacgagaaacgag
gacaacgacaacgatgatgaacacgacatggaagactttggcgcggctagaattacaccg
gcgagaggcgcgcgcgtgcgcgtgttccagagacaccgcgacactggacaccatcacggc
gggcccagaacgcctccgattggtaacatgaatttgcctgcaccggatccaaacagcgat
tacgcgtcgtggctcgagcacgccacgaaaggctggcgcataaagcgcaaggaaaagcgc
gagcgaaaacatcgagaagatctcgaagatcaacgtcgcgaacgcgagggccttcctcgt
cagaagcgccgtcacagcgcaaacgacgatagtgtcatcggccaaatggacttgtttctc
gagaacgtcgacgagtctttggccacctctccgtggcagattgtctccatcgatgattac
tcgcgaggcaacgcgccttcatccttggaagatggcggcgccgaagtcgaagaacctccg
gcgggcgttttccgcgtctgggtcgtcgccgatggcgccatgcgttccgttttgctctct
gcgccgagaaaagtgtacgttgccacgcaccatcccgatcccgaaggtgatagaggtttg
aacgggaaaaagcgcgtcaacgttgcgttaccgcgagcacaaaacacgaataatttcatg
acggcagacggcacgagcacgttgaatgtctacgaagttgagtttgacgcttcgaaattg
tccgcggttcaatacggcagagacgtcgcagcgttactcgcggataaaaacgtagttggc
gtgtatgaacgagacgtaccgttagaagattggtcgattcaaaccatcgggtgcgtcgct
cgagtgaagagagaagccgcgaatgaaatattagacgatttgaaaaagacgcacaaagaa
gggttgaagaagaaagtgcaacctatgttggaagtatccgcgacgaatttggacatgaaa
acgacgacagaagtgaactacttgccgtctatgatggactttacggacgatcgcgcgctt
tcatcaaagggtttgttgcgccactgctcgatttatcacgcggcgttggacggcaaaggc
gtctttgccgcacactttccaaagagaggcggtaaagggacatcgaaaggtttgctcata
ttgctccaacctggaggaaaatcggttcgcgaagttgacagtgaattcgtttcggaaatg
tttgaaggcgagaaaggacgcgtcgacggtaacgaggaaatggaagaagatcgagattct
gaaaagtgcgaatggcgcgtcatttacgccaggacgtctgcggcggcagcgaaaaacctc
aacgacgcagtctctgagtttgcaaatgcctcgaacggtccaagcgtcgtcttgctcgaa
gcaccgcctgttggttacggtattcctgaattcgatgacgacgacgacgctttcgcttcc
tcttgcgccggcatgaacaagaacgcgaaagcggcgaaacgttttgagaaagtgctcacc
gccttaaaagattcgcccattctagtcgtcccgttcaactctggcgacatcgagtatctc
agtgaaaaaggcatcgcgtggcaacgcgacgctgcgcagttagctgctatccgtctcgcg
cacacctcgaaacatttggagaagtctatccaaatctcccgctacgcgcacattcctctc
tgtaatctcgattcggactggtccacgcacgttttagatacattcttcgcgcgacgactt
cgcgatgaacatcaagttctctggtctgggaaaaacggcaagccagactacggtggtgga
tcaatggatgatcagcttagttcgacgttgactttggaatcgatggaatcgccaagatgc
gaactttcgaaatccggcgtttacagatccgtctgttgcgagctgcgcgtccatcacttg
gtggtttgcgccatcgtgaattcacacatcttgaacgatctcgaacaaggcgcgttgtta
ggtttcgatggaggcaatgctaccgtcgccgaccgcggtggacacgacgcgtcgaacgcg
tttcggacgttgaggaagatggtggcagagatgctccgagacgcgtcagaacgaggcaac
gaaatcgccgacgccactttggcgcagcttcgacgctggatattttcttccaattcgaga
atgcgagaaccgggtttacagcatttggtggagttgtgttcgagaaaagtgttcacgtta
ctcatatcagaactcaaccgattaggcgcggatgtcgttttcgcggatacgcgacgcgtc
atcgtgtcgacgaagaagaattcgttggcctcggcgtcggcattcatcacgggtttacgt
aacgcgttaggtacgcgggagttattcaactggctcgaactcgaacccacgaaggtctgg
cacacgctcttatttagaggaccgcacgatttcgggggtttggctgcagacgagaccgtc
cttcagaagttgttcttgaacaacggggctggggaggcgccgatggagacggaaaacgtc
ccgacggatacacaactcgatccacatgccgtcgaaggggacgaagcatcgctcgaaatg
cactggaacatcgccacttttcttccagaggcgttgagcgatcacttcaaagcgatcgct
ggcgactttatcgtccttccgtggaaacgcgaacgcgaactcggtcccgatggtcgcttc
ggtgtcgcgaaagaggacaaagacgtgtctgctgcgcagacggatagaataaaggcacaa
ctggaagcaccagatgatttgagcgatttggaactcaatgaggacgataccaatgaagag
aacgcggactccgccgccgagaggagggccgacgccgacgatgggaaggagaacgcaact
ccagagcaaacgaaaaaggagagtaaataccacgcggacgacgcgaataaccaaaatttg
gctagaaacagactcaaagttgaggaagagaaagcgacatggctctgtgcgcaaatagat
tcgcactttacgccgaaaattctccaagtcgcgcgcggatttgaaaagcacgcgtcgaga
tccacgcacggcgctactcgtctcgacaagaggtacttgttcccggaaaatttgcccgga
gcgcatttaccaaatcaccttcgaggcaacgcggcgttagcgttcgtcaaaacagtaatt
gccgtgctttctctcgatgacacgatcgaagatgcggttgccagatgtcgcaaaaatgca
ctcaagttactctccgttccagagtttggtccggaagcgaggtttcgcgaaccgtgcatc
tctttcgcgttacgcgacgtcgtgtgcgaatgttgcggcgacgttcgagatttagatttg
tgcagagatccagatttagccgatggcgagtggcgctgcgcggagtgcgagaatcgatac
gatctccagtggattgagatgaaactctgtgacgaagtaaacgcgcgcgttcgcaaagcg
cagacgcaagatttgaagtgcaaaagatgcacgagaattaaagttggtcacgtccagaac
cgatgcccgtgtggtggtttgttcgaaaccacttctaagccgggcgccttgcgtgatggt
ttgcgcgtgtttcggaacgtcgcgagatggcacgaatttgacgttttagcttcagtcgtt
cacttctgcgaaaatcaaacttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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