KEGG   Bathycoccus prasinos: Bathy16g00690
Entry
Bathy16g00690     CDS       T03089                                 
Name
(RefSeq) hypothetical protein
  KO
K07562  60S ribosomal export protein NMD3
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03008  Ribosome biogenesis in eukaryotes
bpg03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Bathy16g00690
   03008 Ribosome biogenesis in eukaryotes
    Bathy16g00690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bpg03009]
    Bathy16g00690
Ribosome biogenesis [BR:bpg03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    Bathy16g00690
SSDB
Motif
Pfam: NMD3 NMD3_OB NMD_SH3 DUF4778
Other DBs
NCBI-GeneID: 19011346
NCBI-ProteinID: XP_007508708
UniProt: K8F687
Position
16:145810..147507
AA seq 565 aa
MVRRAQPGLVLCCLCATSISPNPTGMCVECIKTRVDITEGIQKQCSVIHCNQCARYLQPP
KHWIRADLESKELLTFCIKRVKGLNKVKLVDAGFVWTEPHSKRLKTKLTVQKEVLNGAIL
QQSFVVEYVVEWNMCDACARAAANADQWQACVQVRQKVEHKRTFLFLEQLILKHSMEVNA
IGVKSQPDGLDFYYGHRSHGLKMVDFIGSVLPIRSRNDKQLVSHDANDNTYNYRFTLMVE
IVPMCREDLVCLPPKTSKSFGGIGPVVLCTRVGSSMQFTETHTLRRVWLNSEQYWRYPFV
AVANSKQLCEYIVLDLEIVNGNEWEQNGGDDGLGENRSQLFNGSQFGGNASTIGGKQRRA
NRKNLLADVTVARSRDFGTNDITFFTRTHLGSVLKVGDTALGYDLTNVQISDESFDSYVE
KVGESRIPDVVLVKKSYAEKRKKRRDRGYRRAWELKRMDINEEEETNKKDDAEKRMQDEE
LFMQELEEDFEGRAQINVYKKKNEDLDAVIRANQNALANETDDEDDDENDEIPEIKLEEL
LDDMKLSDVEEEEEEEEEGMEMEIH
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggtgcgccgcgcacaacctggactggtgttgtgttgcttgtgtgcgaccagcatctct
ccaaacccgaccggcatgtgcgtcgagtgcatcaaaacgagagtggatattaccgagggg
atacaaaagcagtgttcggtgattcattgcaaccagtgcgcgaggtatttgcaaccaccg
aagcattggatacgggcggatttagagagcaaagagttgttgacgttttgcatcaaaaga
gtgaaaggattgaataaagtgaagctggtggacgccgggttcgtgtggaccgagccgcac
tcgaaacggttaaagacaaagttgacggtacaaaaagaggtgctcaatggcgctattttg
cagcaaagttttgtggtggaatacgtggtggagtggaacatgtgcgacgcgtgcgcgaga
gcggcggcgaacgcggatcagtggcaagcgtgcgtgcaagtaagacagaaagtggaacat
aagaggacgtttttgttcttggaacagttgattttgaaacactcgatggaggtgaacgcg
attggggtgaaatcgcaaccggacgggttggatttttattacgggcacaggagtcacgga
ttgaaaatggtagattttatcgggtcggtgttacctattcggagcaggaacgataagcag
ttagtttcgcacgacgcgaacgataacacgtataattataggttcacactgatggtagaa
atcgtaccgatgtgtcgcgaggatttagtgtgcttgccaccaaaaacgagcaagagtttt
ggagggatcgggccggtggttttgtgcacgagagtcgggagcagcatgcagttcacggaa
acgcacacgttgagacgcgtttggttgaatagcgaacagtactggcgatatccattcgtg
gccgtggcaaattccaagcagttgtgcgagtacatcgttttagatttagagattgtaaat
gggaacgagtgggaacaaaacggcggcgacgacggactcggggaaaaccggtcgcaatta
ttcaacgggtctcagttcggaggcaacgcgagcacgattggtggtaaacaacgaagagcg
aataggaaaaacttgctcgccgacgtcacggtggcgagatcgagggatttcgggacgaac
gacatcacttttttcactcgaacacatttaggttcggtgttgaaagttggcgataccgcg
ttggggtacgatttgaccaacgtgcaaatctcggacgagtctttcgattcatacgtggaa
aaagtaggcgagtcgaggataccggatgtcgttttggtcaagaagtcgtacgccgagaag
cgaaagaaacgacgagaccgaggatatcgcagagcctgggaactcaaaagaatggacatt
aacgaagaagaggaaacgaacaagaaggacgacgcggaaaagagaatgcaagacgaggag
ttgtttatgcaagagttggaggaagatttcgaaggccgcgcgcaaatcaacgtgtacaag
aagaaaaacgaggatttagacgcggttattcgagcgaatcaaaacgcgttggcgaacgaa
acggacgacgaggacgacgacgagaacgacgagattcccgaaatcaagttggaggagttg
ttggacgatatgaagttgagcgacgtggaagaagaagaagaagaagaagaagaagggatg
gaaatggagattcattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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