KEGG   Paraburkholderia phymatum: Bphy_0539
Entry
Bphy_0539         CDS       T00704                                 
Name
(GenBank) exodeoxyribonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
bph  Paraburkholderia phymatum
Pathway
bph03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Bphy_0539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bph03400]
    Bphy_0539
Enzymes [BR:bph01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Bphy_0539
DNA repair and recombination proteins [BR:bph03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Bphy_0539
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon BLH_phosphatase
Other DBs
NCBI-ProteinID: ACC69731
UniProt: B2JDV5
Position
1:610302..611681
AA seq 459 aa
MNSESQSSSPIGAGGDAVVPVSVLNRAIGNMLERSFPLVWVAGEVSNFTRAASGHWYFSI
KDAQAQMRCVMFRGRAQYAEFTPREGDKIEVRALVTMYEPRGELQLNVEAVRRTGQGRLY
EAFLRLKAQLEAEGLFDPQRKRALPAHPRSIGIVTSLQAAALRDVLTTLARRAPHIPVIV
YPAPVQGAGVSAKLAAMVEAANRRHEVDVLIVCRGGGSIEDLWAFNEEVLARAIAASDVP
VVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRDLDHRHATLARGFGRMMER
RAQQLDWLARRLVSPAERLARQRTHLQQLSVRLASAGVRPVRDARARFSLVQMRWQRWRP
DLTSHRSHVTGLAERLERALLRQHERQVARVETLAARLEVLSPQRTLERGYAALLDAQSG
RAVRAPSSLKPGRRMTVHLAEGSADIALSDVQPRLTDGF
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgaattccgaaagtcagtcctcgtcccccatcggtgctggcggcgatgccgtcgttccc
gtgtcggtcctcaaccgtgcgatcgggaacatgctcgaacgttcgttcccgctcgtctgg
gtcgcgggcgaagtgtcgaacttcacgcgtgctgcgagcggacactggtacttctcgatc
aaggacgcgcaggcgcagatgcgctgcgtgatgttccgtggccgcgcgcaatacgccgag
ttcacgccgcgcgaaggcgacaagatcgaagtgcgtgcgctcgtcacgatgtacgagccg
cgcggcgaactccagctgaacgtcgaggcggtgcgccgcacgggccagggccggctctac
gaagcattcctgcgactgaaggcgcaactcgaagccgaaggtctgttcgatccgcagcgc
aagcgcgcgttgcccgcgcatcctcgttcgatcggcatcgtcacgtcgttgcaggccgcc
gcgttgcgagacgtgctgactaccttggcgcgccgcgcgccgcacattcccgtgatcgtg
tatccggcgcccgtacagggcgcgggcgtcagcgcgaaactggccgcgatggtcgaggcg
gcgaaccgtcggcatgaagtcgatgtgctgatcgtgtgccgcggcggcggctcaatcgaa
gacttgtgggcattcaacgaagaagtgctggcccgcgcgatcgcggcgagcgacgtgcca
gttgtgagcggcgtgggtcacgaaaccgacttcacgatcgccgacttcgccgccgacgtg
cgcgcgccgacaccgacgggcgccgccgaactcgtcagcccgcaacgcgtgctgctgttg
cgcgacctcgatcatcggcacgcgacactcgcgcgcggatttggacgcatgatggagcgc
cgtgcccaacaactcgactggctcgcgcgccgcctcgtgtcgcctgccgaacgactcgcg
cggcaacgcacgcatttgcagcagctcagcgtgcggctcgcgtcggcgggtgtgcggccc
gtgcgcgatgcgcgtgcgcgcttctcgctcgtgcagatgcgctggcaacgctggcgtccc
gatctcacgtcgcatcgttcccatgtcaccggccttgccgagcgactcgagcgtgcactg
ttgcgccaacatgaaagacaggttgcgcgtgtggaaacgcttgcggcgcggctcgaagta
ttgagtccgcaacgcacgctcgaacgcggatacgctgcattgctcgatgcgcaaagcgga
cgcgcggtgcgtgcgccatcgtcgttgaagccgggtcggcgcatgaccgttcacctcgcg
gagggctcggcggatatcgcgctgtcggatgttcagccgcgtcttacggatggcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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