KEGG   Candidatus Blochmannia pennsylvanicus: BPEN_113
Entry
BPEN_113          CDS       T00272                                 
Symbol
deaD
Name
(GenBank) cold-shock DeaD box ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
bpn  Candidatus Blochmannia pennsylvanicus
Pathway
bpn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BPEN_113 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpn03019]
    BPEN_113 (deaD)
   03009 Ribosome biogenesis [BR:bpn03009]
    BPEN_113 (deaD)
Enzymes [BR:bpn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BPEN_113 (deaD)
Messenger RNA biogenesis [BR:bpn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BPEN_113 (deaD)
Ribosome biogenesis [BR:bpn03009]
 Prokaryotic type
  rRNA helicases
   BPEN_113 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_22
Other DBs
NCBI-ProteinID: AAZ40753
UniProt: Q493T2
Position
133041..134750
AA seq 569 aa
MSKTVDSFIDLGLNRYIVNVLHDVGYTKPLPIQIQCIPYLLAGYDVLGMAHTGSGKTAAF
VLPLLHNVDINNSCSQGLIITPTRELAIQIGRVCSNFAKYMKKINVVTLYGGQSYGIQLS
ALNKRPHIIVSTPGRLIDHLNRGTANLSQLKTLVIDEADEMLRMGFLEDVERIIKNIPVK
RQTALFSATLPMGIRRISYRFMNNPKEVFIHSNTSMCANIRQSYWLVHSGIAKHEALMRF
LETEDFDAAIVFVRTKYATLEISEILERFGYNSAALNGDMNQTVRHQTLDRLRHGKLDIL
IATDVAARGLDVHRISLVINYDIPINSDAYIHRIGRTGRAGCMGKSLLFVEHKEYRLLRH
IERKIKLKIPEVQYPTSETLFDCRLSRFTNKVEYQLSTENDDLDVYRSLLPQIKPRRDLT
TENLAAVLLKIAQGNRPLVFPPDPIIKNKSVSKIRINSNRQNCFRVENRVIKTRLQSKIS
DNMDAYHISVGRNDGVKIRHIIRVLSNNIANIRYHEIGNIKLFSFHAIIELDKGLSSNKI
LTQLSHARILNKPINMKFLGNMSSCNDVH
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgtcgaaaactgtagactcttttatagatttaggattaaatcgttatattgtcaatgtt
ttacatgatgttgggtatacaaaacctctacctattcaaattcaatgcattccatattta
ttagctggatatgatgtgttaggaatggcgcatacaggtagcggaaaaactgcggcattt
gtcttaccattattacataatgttgatattaacaattcttgttctcaaggtttaattata
acgcctactcgagagttggcgatacaaattgggagagtgtgttctaattttgcaaaatat
atgaaaaaaataaatgttgttactttatatggagggcaaagttatggcattcaattaagt
gctttaaataagagacctcatattatagtaagtactccaggtagactaatagatcattta
aaccgtggaactgctaatttatctcaattaaaaactttagtaatagatgaagctgatgaa
atgttgcgcatgggatttcttgaagatgtagagcgtatcattaaaaatattccagttaaa
cgtcaaacagcattattttctgctactttacctatgggtattcgtcgtataagttatcga
tttatgaacaatccaaaagaagtatttatccattctaatactagcatgtgtgctaatatt
agacaaagttattggttagtacattcaggaatcgctaaacatgaggctttaatgcgtttt
ttagaaacagaagattttgacgcagctattgtttttgttcgtactaaatatgcaacgttg
gagatttccgaaatattagagagatttggttataatagtgcagctttgaatggagatatg
aatcaaacagtacgacatcagacattagatcgattaaggcatggtaagttagatattctt
atagctactgatgttgctgcacgtggattagatgttcatcgtattagtttagtaataaat
tatgatataccaataaattctgatgcttatatacatcgtataggtagaactggtagagca
ggatgcatgggaaaatccttattatttgtagagcataaagaatatcgtttgttgcgtcat
attgaacgtaaaataaaactaaaaattccagaggttcagtatcctacctctgaaacttta
tttgattgtcgattatcgagatttacgaataaagtagaatatcaattaagtaccgagaat
gatgatttggatgtatatcgatctctattacctcaaataaaacctagaagagatttgaca
acggaaaatttagcagctgttttgctgaaaatagcgcaaggcaatcgtccattggtattc
cctccagatccgattattaaaaataaatcagtttctaaaatacgtataaatagtaatcgt
caaaattgttttcgtgttgaaaatagagttattaaaactaggttgcaatctaaaatttct
gataatatggatgcttatcacatatcagtagggcgtaatgatggagttaaaatacgtcat
attattagagtgctttcgaataatattgctaatattcgctatcacgaaataggtaatatt
aaattattttcctttcatgctattattgagttagacaaagggttatctagcaacaaaata
ttaacgcagttgtctcatgcacgtattttaaataaaccaataaatatgaaatttttaggt
aatatgtcctcatgtaatgatgtacattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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