KEGG   Burkholderia pseudomallei NAU35A-3: BBU_3388
Entry
BBU_3388          CDS       T03476                                 
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
bpsa  Burkholderia pseudomallei NAU35A-3
Pathway
bpsa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BBU_3388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpsa03400]
    BBU_3388
Enzymes [BR:bpsa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BBU_3388
DNA repair and recombination proteins [BR:bpsa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BBU_3388
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AIS87058
Position
1:3924966..3926324
AA seq 452 aa
MAWTEAALEELGLAPAWVRRDAARAADVNEAAAHAAGETAVAAVGRGAQPASPDAPREPA
RRIARDGGCDGGQDGASGDAGSASPNDAAHAMARVAGAEASAADAVADEHAALARQAGDG
RGQARQAAAESGARAAADAPAPAAAPASRTRDATIARGASPDEPGVAGVVGVADEPSVAG
GARRARTSGGGAEVPASALDWTDAAEATRPAAAPAPAALTGGDAGAAASDEDMSWFDLEP
VHEPALPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADWML
VGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPDEV
ARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIASMRGRVHQYEGVPVIVTYHPAY
LLRSLQDKAKAWSDLCLANDTYRSAAPAADPP
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggcatggactgaagcggcgctcgaagaactggggctcgcgcccgcgtgggtgcggcgc
gacgcggcgcgcgctgcggacgtgaacgaggcggccgcgcacgcggccggagaaaccgcg
gtcgcggcggttgggcgaggagcgcagccggcgtcgccggatgcgccgcgcgagccggcg
cgtcggatcgcgcgcgatggtgggtgcgacggcgggcaagacggcgcgagtggcgacgcg
ggatcggcgtcgccgaacgacgcggcgcatgcgatggcgcgtgtcgcgggcgcggaagcg
agcgcagccgacgccgtcgccgacgaacacgcggcgcttgcgcggcaggccggcgacggg
cgcggacaggcgcggcaagcggcggccgaatccggcgcgcgggcggcggcagatgcgccc
gcgccggccgcggcgcccgcatcgcggacgcgggatgcgacgattgcgcgcggggcttcg
ccggacgagccgggcgtggcaggcgtggtgggcgtggcggacgagccgagcgtggcgggc
ggcgcacgccgcgcgcggacgagcggcggcggcgcggaggtgccggcgagcgcgcttgac
tggacggatgcggccgaggcaacgcgtccggcggcggcgcccgcgccggccgcgctcacc
ggtggcgatgccggcgcggcggcgtccgacgaggacatgtcgtggttcgatctcgaaccg
gtgcacgagcccgcgctgccggacgttgccgcacggcccgccgccactacgccgtccgtc
gccgagctcggctgggacgaactgcgcgcgcgcgtcgccgactgcgagcgctgccgcctc
tgcgaaaagcgcacgaacacggtgttcggtgtcggtgacgagcgcgccgactggatgctc
gtcggcgaggcgcccggcgagaacgaggacaagcaaggcgagccgttcgtcggccaggcg
ggcaagctgctcgacaacatgctgcgcgcgctggcgctcaagcgcggcgagaatgtctac
atcgcgaacgtgatcaagtgccggccgcccggcaaccgcaatccggagcccgacgaggtc
gcgcgctgcgagccgtatctgcagcggcaggtcgcgctcgtgaagccgaagctgatcgtc
gcgctcggccgcttcgccgcgcagacgctgctcaagacggacggaagcatcgcttcgatg
cgcgggcgcgtgcatcagtacgaaggcgtgcccgtgatcgtcacgtaccatccggcgtat
ctgctgcgcagcctgcaggacaaggcgaaggcctggtccgatctgtgtttggcgaacgat
acctaccggagtgccgcgcccgccgccgatccgccatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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