KEGG   Bacillus pumilus SAFR-032: BPUM_3148
Entry
BPUM_3148         CDS       T00599                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bpu  Bacillus pumilus SAFR-032
Pathway
bpu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BPUM_3148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpu03400]
    BPUM_3148
DNA repair and recombination proteins [BR:bpu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BPUM_3148
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BPUM_3148
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD DUF87 AAA_30 AAA_22 TrwB_AAD_bind AAA AAA_7 AAA_16 AAA_25 AAA_19 HEM4 AAA_5 UB2H AAA_6 P-loop_SecA
Other DBs
NCBI-ProteinID: ABV63802
UniProt: A8FHT5
Position
complement(3123516..3125501)
AA seq 661 aa
MSDRFELVSNYQPQGDQPKAIEKLVEGIHQGKQHQTLLGATGTGKTFTVSNLIKEVNKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYRELVLSLRTEMEIERNQLLRKLVDIQ
YSRNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEILGDREH
VAIFPASHFVTREEKMEKAIVNIEQELEEQLEKLRDNGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFMIVVDESHVTVPQIRAMYNGDQARKQV
LVDHGFRLPSALDNRPLTFDEFEKHINHIVHVSATPGPYELEKTPEVVEQIIRPTGLLDP
IIEVRPIEGQIDDLIGEIHARIEKNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTIGR
AARNSEGRVIMYADKMTKSMDIAIQETKRRREQQEAYNEKYGITPQTIHKKIRDAIKATK
IHEESEEYETNAAPKLSKMSKKEREKVIEKVELEMKDAAKALDFEKAAELRDLLLELKAE
G
NT seq 1986 nt   +upstreamnt  +downstreamnt
gtgagtgaccgctttgaattagtttctaactatcagccccaaggagatcagccgaaggca
attgaaaagcttgtggaggggatccatcaggggaaacagcatcaaacgctgttaggtgct
acaggtacgggaaagacctttactgtatccaatctgattaaagaagtgaacaaaccgaca
cttgtcattgcgcataataagacacttgccggtcagctatacagcgagttcaaggaattt
tttccgaataatgctgtcgaatattttgtaagttactatgattattaccaaccagaggcg
tatgtgcctcagacggatacatttattgaaaaggatgccagcatcaatgatgagattgat
aagctgagacactccgctacgtcctcgttatttgagcggagagatgtcatcatcattgcc
agtgtctcctgtatttatggcttaggttcgccagaggaataccgagagcttgtgctgtct
ttacgtactgaaatggagattgaacgcaatcagcttctacgtaagctggtggacattcag
tattctcgtaatgatatagattttcagcgcggaaccttccgagtacgaggagacgtcgtt
gaaatttttcctgcttcacgtgatgagcattgtatcagagtggagtttttcggtgatgaa
attgaacgtattcgagaagtggatgcactgactggagaaatactcggtgatcgtgaacat
gtggctattttcccagcatctcacttcgtcactagagaagaaaaaatggaaaaagcgatt
gttaatattgaacaagagcttgaggagcagctcgaaaagcttcgagataatggaaaattg
ctagaagcacagcgccttgagcagcggacaagatatgaccttgagatgatgagagaaatg
ggcttttgttcaggaatcgagaattactcaagacatctgaccttgcgtcctcctggttca
accccttatacattgcttgattatttcccagatgattttatgattgttgtcgatgagtcg
catgtgacggtcccgcaaatccgcgcgatgtacaacggggaccaagcaagaaagcaagtg
ttggttgatcacggattccgtctgccttcagcacttgataacagaccgctcacctttgat
gagtttgaaaagcatatcaatcatattgtgcatgtatctgccactccgggtccttatgag
cttgagaaaaccccagaggttgtggaacaaattattcgtccaacaggtttacttgatcca
attattgaagtgcgtccaattgaaggtcaaattgatgacttaattggagaaattcatgcg
cggattgagaaaaatgagcgtgtgctcgtgacgacgctgacgaagaaaatgtctgaggat
ctgacagattatttaaaagagattggaatcaaggtcaattatctgcattcagaaattaag
acccttgagcggattgagattattcgcgatttacgcctcggaaaatatgatgtacttgtg
ggaatcaaccttcttcgtgaaggactggatattccagaggtgtcgcttgtgacgatttta
gatgcagataaagagggcttcttacgctctgaaagatcccttatccagacgattggccgg
gcagcgagaaattcagaaggccgggtcattatgtatgcagataaaatgaccaaatcaatg
gatattgcgattcaagaaacgaagcgaagacgagagcagcaagaggcatataatgaaaaa
tatggaattacaccgcaaaccatccataagaaaattagagatgccattaaagcaacaaag
atacatgaagaatcggaagaatatgaaacaaatgcagcaccaaagctgtcaaaaatgagc
aaaaaagaacgagaaaaagtgatcgaaaaggtcgagttggaaatgaaagatgcagcaaaa
gcgcttgattttgaaaaagcagcagaattaagagatctattgctagagctaaaagcggaa
ggatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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