KEGG   Bacillus pumilus MTCC B6033: BW16_12390
Entry
BW16_12390        CDS       T03175                                 
Name
(GenBank) competence protein ComE
  KO
K01493  dCMP deaminase [EC:3.5.4.12]
Organism
bpum  Bacillus pumilus MTCC B6033
Pathway
bpum00240  Pyrimidine metabolism
bpum01100  Metabolic pathways
bpum01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:bpum00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    BW16_12390
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bpum02044]
    BW16_12390
Enzymes [BR:bpum01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.12  dCMP deaminase
     BW16_12390
Secretion system [BR:bpum02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   BW16_12390
SSDB
Motif
Pfam: dCMP_cyt_deam_1 MafB19-deam Bd3614-deam DUF3845 SNAD4
Other DBs
NCBI-ProteinID: AHL72150
Position
complement(2342631..2343200)
AA seq 189 aa
MERISWNQYFMAQSHLLALRSTCERLAVGATIVRDKRIIAGGYNGSIAGDVHCADVGCYV
IDHHCVRTIHAEMNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKDYK
NHPYAVDLFEQAGVQTEQVELDEMIIDLKNQEKLAFVADLIGKLSESGRSETEIRQMHEK
ANQLFTSYV
NT seq 570 nt   +upstreamnt  +downstreamnt
gtggagagaatttcatggaatcaatattttatggctcaaagccatttgcttgccttgcga
agcacctgtgagcggctagctgttggggcaacgatcgtaagagacaagcgcatcatcgca
ggtggatataatggatccattgccggtgacgtgcattgtgcagatgtaggatgctatgtc
atagatcatcactgcgttcgtacaatccatgcggagatgaacgctattttacaatgtgcc
aaatttggtgcaccaacggctgatgctgaaatatatgtgacgcattttccttgcttgcag
tgctgtaaagcgattattcaagcaggtattcgaacagtgtattatgcgaaggattataaa
aatcatccatatgctgttgatttattcgaacaagccggagttcaaacagaacaggttgaa
ctagatgagatgattattgacttaaaaaaccaagaaaaattagcctttgttgcggattta
ataggcaaactaagtgaatcaggacgtagcgaaacagaaattcgtcaaatgcatgaaaag
gcgaatcaattatttacttcctatgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system