KEGG   Burkholderia pyrrocinia: ABD05_11810
Entry
ABD05_11810       CDS       T03962                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
bpyr  Burkholderia pyrrocinia
Pathway
bpyr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ABD05_11810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpyr03400]
    ABD05_11810
Enzymes [BR:bpyr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     ABD05_11810
DNA repair and recombination proteins [BR:bpyr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ABD05_11810
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 PDDEXK_1 DUF374
Other DBs
NCBI-ProteinID: AKM00828
UniProt: A0A0G3WSE9
Position
1:2565841..2569551
AA seq 1236 aa
MSAVSQPQPALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVVT
FTKAATAELHERIRGRLAQLAHVLAKGDDGSDPFITRLFETTLGEGGTIDREIAEKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFDMEADDASLRFELAADFWRTRVEPAA
ARWPGFATWLVESGAGPAALDAQLARRLKKPLAALRWDGVTEPDESAEAAAAECFAEAAR
MWAAEREAIDALLRTAQPALNQRSHKPDAVADALAAWAAHFAQGEATAALPKAALKLTRT
ALVKATKKGGATPEHAFFDVADALEAAVAAAEAAQRARWLALIAEWLDMAPGELAERKRT
RRVVSFDDLLANLYHALHAHPWLAETLRVRYPAALIDEFQDTDPLQFAIFDRIFAPGGPL
FLVGDPKQAIYSFRAADLHTYLAARASASACYTLAVNQRSTPAIVDACNRFFMSNPRAFV
LDGLDYYAVRAGTRVRAPFVDETDPGPAGDFRVWALPGGEGTLLKRDAQAQAAQACAAEI
ARLMRGAREGRVRLGDTPLSPGNIAVLVQTHRQGSLVKRVLATWGIGSVELAQASVFSTG
DAEQLERVLAAIDAPGDLRRLRAALAADWFGLDAGALWRMEQGDGDASHEASAADSADAM
SWVERFSRYRLLWRERGFAVMWRTFTRELRIAERLMAGADGERRVTDINHLAELTQARAS
AQPGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAIVFCPFLNDGG
LREPPASALPDAREYHDDAGDAVLHYGCDDEAAAHAARQALREQAAERARLVYVALTRAV
YRSYVVAGPYLSSRSTREARRSVLNWLVAGAGHAFDAWLDEPPDEAALDAAWHALAGGPV
SVAPLPVPARRERLAAGHDASQTLAARHATRVLRDAWRMASFSSLTASMAREEAGVAAVP
DDELRPDHDALAEVAPDGEFILADTVAPEPPDDDILVFPRGAAAGECLHRLFELSRFTEP
ESWHKAALGALHDRPVEAEPELATRLPTMMARLVDDVVRTELVPGMRLADLDPAKRLDEM
GFLFPAPSLDLAALRRLLVAHGYPDVALEAGMLAGFIKGFIDMIVEHDGRFWIVDWKSNH
LGTTPDAYGPRALDVAMADHAYHLQALLYTVALHRYLRGRLRDYDYDTHIAGYLYLFVRG
VRPDWRSGGEPAGVHARRPGRALVDALDRMMEGGRA
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgagcgccgtgtcgcagccgcagccggcgctcgaactcgacgtgttcgcgtgcccgctc
gacggcgtcaaccagatcgaggcgtcggccggcaccggcaagacctggaacatctgcgcg
ctgtatgtgcgcctgctgctcgaaaaggatctgggcgcggacgaaatcctcgtcgtgacc
ttcacgaaggcggcgacggccgaactgcacgagcggattcgcggccggctcgcgcagctc
gcgcacgtgcttgcgaaaggcgacgacggtagcgatccgtttatcactcgcttgttcgaa
acgacgctcggcgaaggcggcacgatcgatcgcgaaatcgccgagaagcggatccggcgc
gcgctgcgcgcgttcgaccaggccgcgatccatacgatccacgcgttctgccagcgcgcg
ctgcaggaagcgccgttcgcggccgcgatgccgttcgcgttcgacatggaggccgacgac
gcatcgctgcgcttcgagcttgcggcggacttctggcgcacgcgcgtcgaaccggcggcc
gcgcgctggccgggcttcgcgacctggctcgtcgaatcgggcgccggcccggccgcgctc
gatgcgcagctcgcgcgccggctgaagaagccgctcgccgcgctgcgctgggacggcgtg
accgagccggacgaatcggccgaggccgccgcggccgaatgcttcgccgaggcggcgcgg
atgtgggcggccgagcgtgaggcgatcgatgcgttgctgcgcaccgcgcagcccgcgctc
aaccagcgctcgcacaagcccgatgcggttgcagatgcgctcgccgcgtgggccgcgcat
ttcgcgcaaggcgaagcgacggctgcgctgccgaaggccgcactgaagctcacgcgcacc
gcgctcgtgaaagcgacgaaaaaaggcggcgcgacacccgaacacgcgttcttcgacgtg
gccgacgcgctcgaagcggccgtggcggcggccgaggccgcgcagcgcgcgcgctggctc
gcgctgatcgccgaatggctcgacatggcgccgggcgaactggccgagcgcaagcgtacg
cggcgtgtcgtctcgttcgacgatctgctcgcgaacctgtaccacgcgctgcatgcgcat
ccgtggctcgccgagacgctgcgcgtgcgctatccggcggcgctgatcgacgagttccag
gataccgacccgctgcagttcgcgatcttcgatcgcatcttcgcgccgggcgggccgctg
ttcctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggccgatctgcatacc
tatcttgcggcacgcgcgagcgcgagcgcgtgctacacgctggcagtcaaccagcgctcg
acgcccgcgatcgtcgatgcgtgcaaccgcttcttcatgtcgaatccgcgcgcgttcgtg
ctcgacgggctcgactattacgcggtgcgtgccggcacgcgcgtgcgtgcgccgttcgtc
gacgaaaccgatccgggcccggccggcgatttccgggtctgggcgctgccgggcggcgaa
ggcacgctgctcaagcgcgatgcgcaggcgcaggccgcccaggcctgcgcggccgagatc
gcacggctgatgcgcggcgcgcgcgaagggcgcgtgcggctgggcgacacgccgctgtcg
ccgggcaacatcgcggtgctcgtgcagacgcaccggcagggcagtctcgtgaaacgtgtg
ctcgccacgtggggcatcggcagcgtcgaactggcgcaggcatcggtgttctcgaccggc
gacgccgagcagctcgaacgcgtgctggcggcgatcgacgcgccgggcgacttgcggcgc
ctgcgcgcggcgctcgcggccgactggttcggcctcgatgccggcgcgctgtggcggatg
gagcaaggcgacggcgatgcgtcgcacgaagcgtccgcggccgacagtgccgacgcgatg
agctgggtcgagcgtttctcgcggtatcggctgctgtggcgcgaacgcggtttcgcggtg
atgtggcgcacgttcacgcgcgaactgcggattgccgagcggctgatggccggcgcggac
ggcgaacgccgcgtgaccgacatcaaccacctggccgagctgacgcaggcgcgcgcatcc
gctcagccgggcatcgcgccgacgctgcgctggctcgctgcgcaacggctcgacggcggc
ggcgaggaagcgcagttgcgcctcgaatccgatcgcaacctcgtgcagatcgtgaccgtg
cacaagtcgaagggccttgaatacgcgatcgtgttctgtccgttcctgaacgacggcggg
ttgcgcgagccgccggcgtccgcgctgcccgatgcgcgcgagtatcacgacgacgcgggc
gacgcggtgctgcattacggatgcgacgacgaggcggctgcgcacgcggcgcggcaggcg
ctgcgcgagcaggccgcggaacgcgcgcggctcgtctacgtggcgctcacgcgcgcggtc
tatcgcagctacgtcgtcgccgggccatacctgtcgtctcgctcgacgcgcgaagcgcgg
cgcagcgtgctcaactggctcgtcgcgggcgccggccacgcgttcgatgcgtggctcgac
gagccgcccgacgaagccgcgctcgacgccgcgtggcacgcgcttgcaggtggccccgtg
agcgtcgcgccgctgccggtgcccgcgcgccgcgagcgtctcgcggccgggcacgacgca
tcgcagacgcttgcggcgcgccatgcgacgcgcgtgctgcgcgatgcgtggcggatggcg
agcttcagctcgctgaccgcgtcgatggcgcgcgaggaggcgggcgtcgcggctgtgccc
gacgacgaactgcggcccgaccacgatgcacttgccgaggtggcgccggacggcgagttc
atcctggccgatacggttgcgcccgaaccgcctgacgacgacatcctcgtgtttccgcgc
ggcgcggcggcgggcgagtgcctgcaccggctgttcgaactcagccggttcacggaaccg
gagtcgtggcacaaggccgcgctcggcgcgctgcacgaccggccggtcgaggccgagccc
gaactcgcgacgcgcctgccgacgatgatggcgcggctcgtcgacgacgtcgtgcgcacc
gaactagtcccgggcatgcggcttgccgatctcgatcccgcgaagcggctcgacgaaatg
gggttcctgttcccggcgccgtcgctcgacctggcggcgctgcgccggctgctggtcgcg
cacggctacccggacgttgcactggaggcgggcatgctcgccggtttcatcaagggtttc
atcgacatgatcgtcgaacacgacggccgcttctggatcgtcgactggaagtcgaaccat
ctcggcacgacgccggacgcgtacggcccgcgcgcgctcgacgtcgcgatggccgatcac
gcgtatcacctgcaggcgctgctctacacggtcgcgctgcatcgctacctgcgcgggcgg
ttgcgcgattacgactacgacacgcatatcgcgggctacctgtacctgttcgtgcggggc
gtgcggcccgactggcgcagcggcggcgagccggccggcgtgcatgcgcggcggcccgga
cgcgcgctcgtcgacgcactcgaccggatgatggaagggggccgcgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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