KEGG   Bradyrhizobium sp. BF49: BF49_0077
Entry
BF49_0077         CDS       T04337                                 
Name
(GenBank) FormamidopyrimidineDNA glycosylase EC 32223
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
brad  Bradyrhizobium sp. BF49
Pathway
brad03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:brad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BF49_0077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brad03400]
    BF49_0077
Enzymes [BR:brad01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BF49_0077
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BF49_0077
DNA repair and recombination proteins [BR:brad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BF49_0077
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: CUT08997
Position
I:complement(84661..85542)
AA seq 293 aa
MPELPEVETVRRGLQPVMEGAKILVAEARRPDLRFPFQPDFVARLKGQVVTGLGRRAKYL
MADLASGDVLLMHLGMSGSFRIIKPDNEVAPGEFHYPRAKDSAHDHVLFRMSSGADIVFN
DPRRFGYMKVIARSALDEEPLLRGLGPEPLGNEFDAAMLARSCAGKTTSLKAALLDQRVV
AGLGNIYVCEALHRSHLSPRRIAATLSTKKGETTDHAKRLVGAIHTVLNDAIKAGGSSLR
DHRQTSGELGYFQHSFKVYDREGEKCTTPRCGGTVKRFTQNGRSTFWCPKCQK
NT seq 882 nt   +upstreamnt  +downstreamnt
atgcccgaattgcccgaagtcgagaccgtccgccgcggccttcagcctgtcatggagggt
gcaaaaatcctggtcgcggaggcccgcaggcccgatttgcgctttcccttccagccggat
ttcgtggcccgactgaagggacaggtcgtcacggggctcggccgccgtgcaaaatatctc
atggccgatctcgcctccggcgacgtgctgttgatgcatctgggcatgtcgggctcgttt
cgcatcatcaagccggacaacgaggtggcgcccggcgagtttcactatccgcgagccaag
gactccgcgcacgaccacgtgctgtttcggatgtcctccggcgccgacatcgtcttcaac
gatccgcgccgcttcggttacatgaaagtgatcgcgcgcagtgcgctcgacgaggagccg
ctgctgcgcgggctcggccccgagccgctcggcaacgaatttgacgctgcgatgctggcg
cggtcctgcgccggcaagaccacgagcctgaaagccgcgctgctcgatcagcgcgtggtc
gccgggctcggcaacatctatgtctgcgaagccctgcatcgctcgcatctgtcgccgcgc
cggatcgccgcgacgttgtcgaccaagaagggcgagacgacggaccatgcaaagcgactg
gtcggcgcgatccataccgtgctgaacgacgccatcaaggccggcggctccagcttgcgc
gaccatcgccagacctcgggcgagctcggctattttcagcactcgttcaaggtctatgac
cgcgagggcgagaaatgcaccacgccgcgatgcggcggcaccgtgaagcgttttacgcag
aacggccggtcgacgttctggtgtccgaaatgtcagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system