KEGG   Brevundimonas sp. GW460-12-10-14-LB2: A4249_14580
Entry
A4249_14580       CDS       T04395                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
brg  Brevundimonas sp. GW460-12-10-14-LB2
Pathway
brg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A4249_14580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brg03019]
    A4249_14580
   03400 DNA repair and recombination proteins [BR:brg03400]
    A4249_14580
Enzymes [BR:brg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A4249_14580
Messenger RNA biogenesis [BR:brg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A4249_14580
DNA repair and recombination proteins [BR:brg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A4249_14580
SSDB
Motif
Pfam: DEAD Helicase_C HRDC RQC RecQ_Zn_bind Rhodanese
Other DBs
NCBI-ProteinID: ANC54757
UniProt: A0A160I022
Position
2951775..2953652
AA seq 625 aa
MPATRPQFSSTDTPDLNDARALLARVWGHADFRGLQGQVVEQILSGGDVLAVLPTGGGKS
VCYQIPAILRPGLGLVVSPLIALMTDQVEALKQQGVAAARLDSGVSLDERSAIWAAARSG
GLDLLYVSPEGLAAGAMMDRLAELPLSLIAIDEAHCVSQWGHDFRPDYRNLGLLAERFPD
VPRIAVTATADARTRDDILRSLRLEEATVFVDSFARPNLQLSAERKESASRAKTDARVIE
LVRERRGKSGVVYCGSRDGCDRVAQALRDAGTNAIAYHAGMDTKERDRRLERFLAEEGAV
MVATIAFGMGVDKADVRFVIHADPPGSLEAYWQEIGRGGRDGEPAEGITLYGPSDIAWSL
RRLDSRPMAEEVKQVQVRKTRQLFAMLDGAVCRAQAVRRYFGEHDAQPCGVCDICGDPPQ
LYDATVPAQKALAAVQRLGGRFGRNRVVDHLTARTKDVQPWEQQLSTWGIGREISLNSWR
EIVDHLLFEGLLAEDPNDGKPLVGLGDPEAVRAVYRGERQIEVRRAPLRADTAPRRRDRS
GEGRNAALETMDADVRARFEALRAWRRDRASEQHVPPYVIFQDRTLLEIAHAEPGDLNSL
GAISGVGQSKLDRYGKGVLEALAAL
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgccggccacgcgcccccagttttcctcgaccgatacgcctgacctgaacgacgcgcgg
gcgttgttggcgcgcgtctgggggcacgccgacttccgggggctgcaagggcaggtggtc
gagcagatcctgtcgggcggtgatgtgctggcggtcctgccgaccggcggcggcaagagc
gtctgctatcagatccccgccatcttgcgccccggactggggctggtggtgtcgccgctg
atcgccctgatgaccgatcaggtcgaggcgctgaagcagcagggcgtcgcggcggcgcgg
ctggattccggcgtgtcgctggacgagcgttcggccatctgggcggcggcgcggtcgggg
gggctggacctgctctatgtgtcgccggaaggcctggcggcgggcgccatgatggaccgg
ctggcggaactgccgctgagcctgatcgccatcgacgaggcgcactgcgtttcgcaatgg
ggtcacgacttccgccccgattatcgaaacttgggcctgctggccgagcggtttcccgac
gtgccccgcatcgccgtcaccgccaccgccgacgcccgcacccgcgacgacatcctgcgc
tcgctgcggctggaagaggcgacggtcttcgtcgacagtttcgcgcgtccgaacctgcaa
ctttcggccgagcgcaaggagagcgcctctcgggccaagaccgacgcccgcgtcatcgaa
ctggtgcgcgaacggcggggcaagtcgggcgtcgtctattgcggcagccgcgacggctgc
gaccgcgtggcccaggccctgcgcgacgccgggaccaacgccatcgcctatcacgccggc
atggacacgaaggagcgcgaccgccggctggaacgcttcctggccgaggagggcgccgtc
atggtcgcgaccatcgccttcggcatgggcgtcgacaaggccgacgtgcgcttcgtcatc
cacgccgatccgccgggcagtctggaggcctattggcaggagatcggccggggcgggcgc
gacggcgagccggccgagggcatcaccctgtatgggccgtccgacatcgcctggtccttg
cgtcggctggacagccgcccgatggccgaggaggtcaaacaggtccaggtcaggaagacc
cgccagctgttcgccatgctggacggcgcggtctgtcgggcccaggccgtgcggcgatat
ttcggcgagcatgacgctcagccttgcggcgtctgcgacatctgcggcgacccgcctcag
ctctatgacgcgaccgtcccggcccagaaggcgttggcggcggtgcagcggctgggcggc
cggttcgggcgcaatcgcgtcgtcgatcacctgaccgcccgcaccaaggacgtgcagccg
tgggagcagcaactgtccacctggggcatcgggcgcgagatttcgctgaacagctggcgc
gagatcgtcgatcacctgctgttcgaaggtctgctggctgaggatcccaacgacggcaag
ccgctggtcgggctgggcgatcccgaagcggtgcgcgccgtctatcgcggcgagcgccag
atcgaggtgcgtcgcgcgcctctgagggccgataccgccccgcgtcgtcgtgaccgatcg
ggcgaagggcgcaatgcggcgctggagacgatggacgcggacgtccgcgcccggttcgag
gccttgcgcgcctggcgccgcgaccgcgcctcggaacagcacgtcccgccctatgtcatc
ttccaggaccggacgctgctggagatcgcccacgccgaaccgggcgacctgaacagtctg
ggcgccatttccggcgtcggtcagtcgaagctggatcgctacggcaagggcgtgctggag
gcgctggccgccctttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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