KEGG   Brassica rapa (field mustard): 103835535
Entry
103835535         CDS       T03449                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
  KO
K12897  transformer-2 protein
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103835535
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:brp01009]
    103835535
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:brp03041]
    103835535
Protein phosphatases and associated proteins [BR:brp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103835535
Spliceosome [BR:brp03041]
 Common components
  Common spliceosomal components
   SR proteins
    103835535
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 103835535
NCBI-ProteinID: XP_033133994
Position
A08:15789585..15791806
AA seq 269 aa
MALCLFSLMYAAEHSELNYNFYLIIILRLFGSRVLYCILLDFCNRGTRSPAPRKKQLRSL
IISTFRSKSRSIPRSRSRSRSLPRPISPSTRRGRSEIENPGNTLYVTGLSTKVTEKDLEA
HFSKQGKVASCVLMLDPHTRESRGYAFVTMDSLRDAERCIKYLNKTLLDGRYIKVEKSHR
KRPRTPTPGQYIGLKRSKDNEKDGDGHSSRGKHDDPDDSGHRWLPRRHNSPRDERKSPRR
DHSPGGGRSPERSREILLETVMVLHNTMK
NT seq 810 nt   +upstreamnt  +downstreamnt
atggctttgtgtcttttttctcttatgtatgctgcagaacacagtgaattgaattataat
ttctatttgattataatcttgagattgtttggaagcagagtattgtactgtattttgctt
gatttctgcaacaggggcacacgatctcctgcaccccgaaagaaacaactcaggtccctg
atcatatccacgtttagatccaaatccaggtccataccgaggagtaggtctaggtcaaga
tctttgccaaggcctatatctccatcaacaaggcgtggaaggtctgaaattgaaaaccct
ggtaacactctctacgtgaccggcctatccacaaaagtcactgaaaaggatcttgaagca
catttctccaagcaaggaaaggttgcgtcctgcgttctaatgctggacccgcacacccgt
gagtctcgtggttatgcctttgttacaatggatagtcttagagatgctgagcggtgcatt
aagtatctcaacaaaactttactagatggcagatacataaaagtcgaaaagtcccataga
aagcgccctagaactcccaccccaggacaatatattggcttgaaacgctccaaagacaat
gaaaaagacggagatggccatagcagtcgagggaagcacgacgatcctgatgattctgga
caccgttggttaccaagacgccacaattcacctcgtgatgaaaggaagtcaccaagacgc
gaccattcacctggtggtggaagaagcccagagagaagtagggagattctgttggagaca
gtcatggttttgcacaacacaatgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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