KEGG   Brassica rapa (field mustard): 103839973
Entry
103839973         CDS       T03449                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00900  Terpenoid backbone biosynthesis
brp01100  Metabolic pathways
brp01110  Biosynthesis of secondary metabolites
Module
brp_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    103839973
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:brp01006]
    103839973
Enzymes [BR:brp01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     103839973
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     103839973
    2.5.1.29  geranylgeranyl diphosphate synthase
     103839973
Prenyltransferases [BR:brp01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   103839973
SSDB
Motif
Pfam: polyprenyl_synt UbiA
Other DBs
NCBI-GeneID: 103839973
NCBI-ProteinID: XP_009114700
UniProt: M4EH31
Position
A07:complement(1581029..1582496)
AA seq 359 aa
MSSVKLSSCVHHHSVRKSGSVPGSNICFLKTPPFLLRQKFTALSVVREESNASIIHQEEA
QSLSFDFMSYMIGKASAVNQALDSAVSLREPVKIHEAMRYSLLAGGKRVRPVLCIAACEL
VGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL
SFAFEHLASTSGVAPARVVRAIGELARAVGSEGLVAGQIVDISSEGMDSNDVGLELLEFI
HVHKTAVLLEAATVLGAIVGGGSDEEIEKLRKFARCIGLMFQVVDDILDVTKSSEELGKT
AGKDLIADKLTYPKLMGLEKSKEFAERLMRDAHEQLQGFDSKKVEPLLALANYIAKRQN
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtcaagtgtgaagctaagctcttgtgtacatcatcactctgtcagaaaatctggatcc
gtacccgggtccaacatatgctttctcaaaaccccaccgttccttctccgtcaaaagttc
acggcgttatcagtcgtcagagaagagagtaacgccagtatcatccaccaagaggaagca
caaagcctcagcttcgatttcatgtcttacatgatcggcaaagctagcgccgtcaaccaa
gctctcgactccgccgtctccctccgagaaccggtcaagatccacgaggcgatgcgttac
tctctcctcgccggcgggaagcgagtgagacctgttctctgcatcgccgcgtgcgagctg
gtcggcggcgaagaatccgtcgcgttgccggcggcttgcgcggtggagatgatccacacg
atgtcgctgatccacgacgatctcccgtgtatggacaacgacgacctccgccgcggaaaa
cccaccaaccacaaagtgttcggcgaagacgtcgcggttttggccggcgacgcgctttta
tcgttcgcgtttgagcacttggcgtcgacgtcgggggtggctccggcgagggtggttaga
gcgatcggggagctagcgagagccgttggatcagaagggcttgtggcgggtcagattgtg
gatatcagcagcgaaggtatggactcaaacgacgtcggattagagcttcttgagtttatc
cacgttcacaaaacggcggttttgctggaggcggcgacggtgttaggagcgatcgttggc
ggtgggtctgatgaagagatcgagaagctgaggaagtttgcgagatgcattggtttgatg
tttcaggtggttgatgatatattggatgtgacgaagtcgtcggaggagttggggaaaacc
gccggaaaagatttgatcgccgataagctgacgtatccgaagttgatgggtctcgagaag
tcaaaggagtttgcggagaggttgatgagagatgctcatgaacagcttcaaggatttgat
tccaaaaaggttgaacctttattggctttggctaattacattgctaaaagacagaactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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