KEGG T03449: 103843821

Brassica rapa (field mustard): 103843821

Entry

103843821         CDS       T03449

Name

(RefSeq) protein transport Sec1a isoform X2

K15292

syntaxin-binding protein 1

Organism

brp Brassica rapa (field mustard)

Brite

KEGG Orthology (KO) [BR:brp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103843821
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103843821
Membrane trafficking [BR:brp04131]
Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    103843821
SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    103843821
Exosome [BR:brp04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103843821

SSDB

Motif

Pfam:

Sec1

Other DBs

NCBI-GeneID:

103843821

NCBI-ProteinID:

XP_009118851

Position

A09:45088971..45094476

AA seq 642 aa
MLGSTKTGDSKAWKILIMDRVTVKVMSKSCKMADITDQGISLVEELFKRREPMPGMDAIY
FIQPSKENIVMFLSDMSGREPLYRKAFIFFSSTIPKELVNHIKSDSSVLPRIGALREMNM
EYFPIDNQGFLTDHDQALQTLYAEDAENSRHFNICLNMMATRISTVFASLKELPFVRYRA
AKSTAPRDLVPSKLAAAIWDCISKFKAIPNFPQTETCELLIVDRSVDQIAPIIHEWTYDA
MCHDLLDMEGNKHVIEVPSKTGGPPEKKEIVLEDHDPVWLELRHTHIADASERLHEKMTN
FASKNKAAQMRSKEGSELSTRDLQKIVQALPQYGEQVDKLSTHVEIAGKINRIIRDTGLR
DLGQLEQDLVFGDAAAKDVINFLRTNQDTNPENKLRLLMIYATVYPEKFEGDKGVKLMQL
AKLSPVDMKVISNMQLIAGSPENKTKSGSFSLKFDTGKTKQANRKDRSGEEETWQLFRFY
PMLEELLEKLVKGDLSKSDYLCMNQSSHKEEESESRTGSVRKSSAPTAVPERKATPHSMR
SRRTATWARPHSSDDGYSSDSVLKSASLDLKKLGQRIFVFIIGGATRSELRVCHKLTSSL
RREVVLGSTSFDDPPQYITKLKLLSEKDIAGAPAQPFKPQYW

NT seq 1929 nt +upstreamnt +downstreamnt
atgcttggatctaccaaaactggggattcaaaagcttggaagatacttatcatggacaga
gttacggttaaagttatgtcaaagtcctgcaaaatggctgatatcaccgaccaaggcatt
tccttggtagaagaacttttcaagagaagggaaccaatgcctggcatggacgctatctac
tttatccaaccttccaaagaaaacattgttatgtttctatctgacatgtctgggagggaa
cccttgtacagaaaggcatttatttttttcagttcaacgatccccaaagaactggtgaat
cacatcaaaagtgattcaagcgtcttaccacgcattggggccttaagagagatgaacatg
gaatacttccccatagacaatcagggatttctaactgatcacgatcaagcattgcaaacg
ctctatgctgaagatgctgagaattctcgccattttaatatttgtttgaatatgatggct
actagaatctctaccgtgtttgcttccctcaaggaattaccctttgttcggtatcgagct
gccaagtccacggccccacgtgacttggttccgtcaaagcttgctgctgctatttgggac
tgtatctctaaattcaaagccattcccaacttcccccagaccgaaacatgtgagctgctc
attgtggatagatcagtggatcagattgctcctatcatacatgaatggacctatgatgct
atgtgccatgatttgcttgatatggaggggaataaacatgttattgaggttcccagtaaa
actggtgggcctccggagaaaaaggagatagtgcttgaagatcatgatccagtgtggctt
gagcttcgacacacacatatagcagatgctagcgagcgtttgcatgagaaaatgaccaac
tttgcttcaaagaacaaagccgcacaaatgagatcaaaagagggtagcgagttgtctacg
cgtgatctgcagaaaatagtacaggcattgccacaatatggagagcaagttgacaaacta
tccactcatgtagagatagctggaaaaattaacagaataataagagacacgggacttagg
gatctagggcagctggaacaagatcttgttttcggagacgcagctgccaaggacgttatc
aatttcctcaggacaaatcaggacacaaacccggagaacaaattgcgactattgatgatt
tatgcaacggtgtacccggagaagttcgaaggtgacaagggcgtgaagctaatgcagctt
gctaagttatcaccagtggatatgaaagttataagcaacatgcaattgatagctggctct
ccagaaaacaagactaaatccggtagtttctccctcaaatttgacaccggaaagacaaaa
caagcaaacaggaaagataggtctggtgaagaagaaacgtggcaactgttccggttttat
cccatgctcgaggagctacttgagaaacttgtgaaaggggatctgtccaaaagcgactat
ttatgcatgaaccaatcgagtcataaggaggaggagagtgaatcccgaacaggatcagtg
aggaagagctctgctcctacggcggttccagagcggaaagccacccctcactctatgaga
tcaagacggacagcaacttgggcacgtcctcattcttctgacgatggctattccagtgac
tcggtgctgaaaagtgcttcactggacttgaagaagctggggcaacgcatctttgtgttc
attattggtggggcaactcgatccgagctccgagtttgccacaagttgacaagcagtttg
aggagagaagtggtactaggctccactagtttcgacgatcccccacaatacatcacgaag
ctgaaactgctgtcggagaaagacatagcgggggctcctgctcagcccttcaaaccacaa
tactggtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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