KEGG   Brassica rapa (field mustard): 103846357
Entry
103846357         CDS       T03449                                 
Name
(RefSeq) ubiquitin receptor RAD23c
  KO
K10839  UV excision repair protein RAD23
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03420  Nucleotide excision repair
brp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103846357
  09124 Replication and repair
   03420 Nucleotide excision repair
    103846357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:brp03051]
    103846357
   03400 DNA repair and recombination proteins [BR:brp03400]
    103846357
Proteasome [BR:brp03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    103846357
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      103846357
SSDB
Motif
Pfam: ubiquitin XPC-binding UBA Rad60-SLD Ubiquitin_2 Dsc3_N Ubiquitin_4
Other DBs
NCBI-GeneID: 103846357
NCBI-ProteinID: XP_018510791
Position
A10:16305429..16308939
AA seq 360 aa
MKIFVKNLKGARFEIQVSPEDSVGDVKKNIETVMGVTAYPAAEQVLIHKGKVLKDETTLA
ANNVSEKSVIGVIKKKPASTGTSTAPASLTALVHAAHPSSTETETPVTPTEPAWDAASNG
NYESISESNIQQILEMVRGAWSREAVAYALCLAYDDLNKALEYIYFGIPVKSEDHYTTEG
TQEQTQEPAEADLEWSLDSLRHTPEFEHLRPLVQSDPSLLMDFLLMLKEQNPPFFQLIQD
NKADFLRLLLEQPQEPNNGGDGGNQVGDSEETQVVQPPKELQADQTNEPNNGGGDGGNQV
GESKETKVEVATPEDYELIERLEALGFERGDAAVAYFACNKNVQVAANHLLGYKHESRRE
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgaagatatttgtcaaaaatctgaagggtgctcgcttcgagatccaagtcagtcccgag
gattcggttggtgatgtgaagaagaacatagagaccgtgatgggagttactgcatatcct
gctgcagaacaagtgcttattcacaaagggaaagtgcttaaagatgaaacaacactagca
gctaacaacgtttccgagaaaagcgttattggcgttataaagaaaaaacctgcatctact
ggaacgtccactgcacctgctagccttactgctctggttcatgcagcgcatccttcttca
actgaaactgagactcctgtaactcctactgaacctgcttgggatgctgcatcaaatggg
aactatgaaagtatttcagagagtaacattcagcagattcttgagatggtccgtggagcc
tggagccgtgaagcggttgcctatgcactctgtttggcatatgatgaccttaataaagct
ttggaatatatttactttgggatcccggtgaagagtgaagatcattacacaacggagggc
acacaggagcaaactcaagaacctgcagaagcagacctagaatggtcacttgattccttg
cgccacactccagagtttgagcatctacgacctctggtgcagtcagaccctagtctccta
atggattttttactgatgctaaaggaacaaaatccgccattctttcagttgattcaagac
aacaaagcagacttcttacgcttattattggagcagcctcaggaaccaaacaacggagga
gatggtggcaaccaagtgggagattctgaagaaacccaagttgtgcagcctcctaaggag
ctccaagcagaccaaaccaatgaaccaaacaacggaggaggagatggtggcaaccaagta
ggagagtctaaagaaaccaaagttgaagtcgccacccctgaggattatgaattaatcgaa
cggctggaagcattgggatttgaaagaggtgatgcggcggtggcgtacttcgcttgcaac
aagaacgtacaagtggctgctaaccatcttctcggttacaagcacgagtctcgacgagaa
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system