KEGG   Brassica rapa (field mustard): 103847993
Entry
103847993         CDS       T03449                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03020  RNA polymerase
brp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103847993
  09124 Replication and repair
   03420 Nucleotide excision repair
    103847993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brp03021]
    103847993
   03400 DNA repair and recombination proteins [BR:brp03400]
    103847993
Transcription machinery [BR:brp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     103847993
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103847993
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 103847993
NCBI-ProteinID: XP_009123235
UniProt: M4FFG5
Position
A09:5929587..5931006
AA seq 321 aa
MDTGATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMNMRFSRDCDACDGDGQCEFCSVEFHLSAKCVTDQTLD
VTSRDLYSADATVTPVDFGVDSSGVADSGEQRGIIIVKLRRGQELKLRAIARKGIGKDHA
KWSPAATVTFMYEPDIIINEDMMDTLTDEEKIDLIESSPTKVFDFDSVTRQVVVVDPEAY
TYDEEVIKKAEAMGKVGLVEIRPKDDSFIFTVESTGAVKASQLVLNAIVLLKQKLDAVRL
SDDTVEADDQFGELGAHMRGG
NT seq 966 nt   +upstreamnt  +downstreamnt
atggacaccggcgccacttaccagagattcccaaaggtgaagatccgcgagctcaaagac
gactacgccaagttcgagctccgcgacaccgacgtatccatggccaacgccctccgccgc
gtcatgatctccgaagtccccaccgtcgcgatcgacctcgtcgagatcgaggtcaactcc
tccgtcctcaacgacgagttcatcgctcatcgcctcggtctcatccctctcaccagcgag
agggctatgaacatgcgcttctctcgagactgcgatgcttgcgacggagatggacagtgc
gagttttgctccgttgagtttcatcttagcgccaaatgtgttacggaccaaaccctggat
gttactagtagggatttgtacagtgctgatgctactgttactcctgttgacttcggcgtc
gattcatctggagttgctgattcaggcgagcaaaggggaattataatagtgaaactgcgg
cgtggacaagaactgaagctaagggcaatagcgaggaaaggaatcgggaaagatcacgcg
aaatggtctcctgcagctacggttacgtttatgtatgagcctgacattattatcaatgaa
gatatgatggacactttgacggacgaggaaaagatcgacttgattgagagcagccctacc
aaagtttttgactttgattctgtcaccagacaggttgtggtggttgatccggaagcatac
acttacgatgaagaagtgatcaagaaagcagaagccatggggaaagtggggctcgttgag
atacgtccgaaagacgacagttttatattcactgttgaatccacaggtgcagtgaaggcc
tcgcagctggtactgaatgctatagttctcctgaagcagaagctcgacgcagtccgtctc
tcagacgatactgttgaagctgatgatcagtttggtgaactcggtgcacatatgcgtgga
gggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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