KEGG   Brassica rapa (field mustard): 103858446
Entry
103858446         CDS       T03449                                 
Name
(RefSeq) elongator complex protein 3
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brp03016]
    103858446
Enzymes [BR:brp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     103858446
Transfer RNA biogenesis [BR:brp03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    103858446
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM Acetyltransf_1 Acetyltransf_10 Acetyltransf_7 FR47
Other DBs
NCBI-GeneID: 103858446
NCBI-ProteinID: XP_009134057
UniProt: M4C8U1
Position
A03:complement(12985089..12988351)
AA seq 565 aa
MATAVVMNGESKKQPRPGRGGFQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK
TQACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
DKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET
RPDYCLGPHLRQMLTYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP
EQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR
TREAGIQDIHHKIKPEQVELVRRDYTANQGWETFLSYEDTRQDILVGLLRLRKCGKNVTC
PELMGKCSVVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIARREHRSNKIGVIS
GVGTRHYYRKLGYELEGPYMVKHLL
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggcgacggcggtagtgatgaacggcgaatcgaaaaagcagccacggccaggtcgcggc
ggcttccaaggccgtggactaacggaggaagaagctcgagttcgcgccatatcggagatc
gtgagcaccatgatcgagcgctcccaccgcaacgagaacgtggacctaaacgcgattaaa
acccaggcttgccggaaatacggcctagcgcgagcgccgaagctagtggagatgatagcg
gcgctgcctgattcggagagagagactctcctcccgaagctccgcgctaaaccggtccga
accgcttcaggaatcgcggtggtggcggttatgtcgaaaccgcacaggtgcccccacata
gcgacgacggggaatatatgcgtgtattgtccaggtggacctgattctgacttcgagtat
agtactcagtcttacactggatatgagcctaccagtatgcgagctattcgtgccaggtat
aatccatatgttcaggcaaggagcaggatagaccagctgaagcggttgggtcacagtgtc
gataaggttgagttcattttgatgggaggtacttttatgtcactgcctgctgagtacagg
gatttcttcatacggaaccttcatgatgctttgtctggacacacttctgccaatgttgaa
gaagctgttgcttactctgaacatagtgcaaccaaatgcattggcatgactattgaaacg
aggccagattactgtcttggacctcatctaaggcaaatgctgacttatggttgcacccga
ctagagattggtgtccagagcacatatgaagatgttgcccgtgacacaaatagaggtcat
actgttgctgcggtagccgactgcttctgcttggctaaagatgctggtttcaaggtggtt
gcacatatgatgcctgatcttcctaatgttggggttgagagagacatggaaagtttcaag
gagtttttcgagagtccgtcattcagagcggatgggttaaaaatatatcctacccttgtg
atacgtggaactggcctttacgaattatggaaaactgggagataccgaaactatccacct
gagcaacttgtggatatagttgcaaggattctctccatggtgcctccatggacacgtgtt
tatagagttcagcgtgatattcctatgcctctggttacgtcgggggttgaaaaaggaaat
ctccgtgagctggctctggcaagaatggatgatttgggccttaaatgccgtgatgttcgt
actcgcgaagctggaattcaggacattcatcacaaaatcaagccagaacaagtagagctt
gttcgtcgtgattacactgcaaaccaaggttgggagacattcctttcatatgaagataca
cgccaggacattcttgttgggttattacgtttgcgtaaatgtggtaagaacgtaacttgt
ccagaactcatgggaaagtgttctgttgtccgtgagcttcatgtatatggaacggctgta
ccagttcatggtcgggaggctgataagttgcaacatcaggggtacggaacacttctgatg
gaagaggcagagaggattgctagaagagaacatcgctctaacaaaatcggtgtgatttca
ggtgtgggaacccgacattactacagaaagttgggttatgaattggaaggtccttacatg
gtgaagcatcttctttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system