KEGG   Brassica rapa (field mustard): 103862144
Entry
103862144         CDS       T03449                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit alpha 1
  KO
K14050  geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:brp01006]
    103862144
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103862144
Enzymes [BR:brp01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     103862144
Prenyltransferases [BR:brp01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   103862144
Membrane trafficking [BR:brp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    103862144
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    103862144
SSDB
Motif
Pfam: PPTA LRR_4 LRR_8 MetW LRR_9
Other DBs
NCBI-GeneID: 103862144
NCBI-ProteinID: XP_009138101
UniProt: M4DBE7
Position
A01:complement(8100540..8104319)
AA seq 679 aa
MHGRPRKAYKPEEEAASAAKAAKLRGLQSQFMANHHNKIYTKEAVDLSTKLLEINPEAYT
AWNYRKLAVEDKLSRIESDPDLVKTILDEELRVVESALKQNFKSYGAWHHRKWVLSKGHS
SVGNELRLLDQFQKLDTRNFHAWNYRRFVVELTKRSEQDELEYTDDMIGSDFSNYSAWHN
RSVLLSSLLARKADGFLPNKKIPDEYKLVQNAIFTDEDDQSGWFYHLWLLDQTVNVETPL
LTSSWPSHGSRISLYAGCSNGSFSKLTTFGSESGSFPLVLYFDQAVGGVSSSTVTIDSEL
KGNEDLVWEPVSKKNSQVSCVWVARLKYISSEPCFGKEYKVKVRVGNSPGIVSSRGFNFS
ASYEFVFTAHVHDTVEESSQEGIVSWTDGFDIWDAESKDLNALATLDRSNAQMDSKWRQE
AIAEEIDLFRELPDSKIGKLTLARLLMAKAMISDDAVKGVHYNEILELYKDLMALDSSHY
QYYKDEHSVALLRKVTSSTEDLSGHLFRCRNMNNSVCLRLNNLSLSRIASVEKLLFVQML
DLSHNELHSTEGLEAMQLLSCLNLSRNRIRSFSALDSLRHLKQLRVLDVSHNHIGEHSVD
TTRYLCSSPLSNSEWPQDEVGSQMPSLATKYWDAYFVLRDLNLKQLDITGNVIAGDEFSS
FVLQVVPKLVWLDGKKLEI
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgcacggccgtccaaggaaggcttacaagccagaagaggaagcagcctccgctgctaaa
gccgctaagctccggggtctccagtctcagttcatggccaatcaccataacaaaatttat
accaaggaagctgttgacttgagcacgaagctcttagagatcaaccctgaggcgtacacc
gcgtggaactaccggaagctagccgtggaggataagctttcaagaatcgaatctgatcca
gacttggtcaagactattcttgatgaagaacttagagtggtggaaagtgctttgaagcag
aacttcaagtcttatggtgcttggcatcatcggaagtgggttttgagtaaagggcattcc
tccgtagggaatgaattgcggcttttggatcaattccagaagctggatacaaggaacttt
catgcttggaactatcgcaggtttgttgtggagctaaccaaaaggtcagaacaggatgag
ttggagtatacagacgatatgattggttccgatttcagcaactattctgcttggcataat
cgtagtgtacttctttcaagtttgcttgcaagaaaggctgacggtttcttaccaaataaa
aagattcctgatgaatataaacttgtacaaaatgctattttcacggacgaagatgaccaa
agtgggtggttttatcatctttggcttcttgatcaaactgttaatgtggagactcctctt
ctcacttcctcatggccttcgcatggttcccgtatcagtctctatgctgggtgctcaaat
ggctctttttctaagctcactacttttggttctgagtcgggttcttttccactcgttcta
tactttgatcaagctgttggtggagtcagttcgtctactgttacgattgactctgaactg
aaaggaaatgaggaccttgtttgggaaccagtttcgaagaaaaactctcaggtgtcttgt
gtatgggttgctcgtcttaaatatataagttcagaaccatgctttggcaaggaatacaaa
gtgaaggtcagagttgggaactctccaggaattgtatcttccagaggatttaacttcagc
gcttcttatgaattcgtctttacagcgcatgttcatgacacagtcgaagagtcgtcgcaa
gaaggcattgtttcatggacggatggttttgatatctgggatgcagagtcaaaggatttg
aacgctcttgctacgttggatcgatcaaacgctcagatggattctaaatggcgtcaggaa
gctatagcggaagagattgacttatttcgtgaattgcctgacagcaaaattggaaagctc
actctggcaaggcttttgatggctaaagctatgatatcggatgatgctgttaagggtgtt
cactataacgaaatcctcgagctgtataaagatctaatggcactggattcttcgcattat
cagtactacaaggatgagcacagcgtagctttactccgcaaggtgacttcaagcactgaa
gacttgtcaggacacctctttcgttgcaggaatatgaacaactctgtatgtctacggctg
aataacttatcgctatctcggatagcctctgtcgagaagttgctgtttgtccaaatgtta
gacctcagtcacaatgagcttcattcaactgaaggattggaggcaatgcaacttctctct
tgcctaaatctgagtcgcaacagaatccggagtttttcagctctggactccctaagacat
ttgaaacagctgagagtgttggatgtttcacacaaccacatcggtgagcactccgtggac
acaacgaggtacctgtgctcttcaccgctctctaattcggagtggcctcaagatgaagtc
ggtagccagatgcctagtttggctaccaaatactgggatgcgtatttcgttttaagagat
ttgaatctcaaacagttagatataacaggcaacgtaatcgcaggggacgagttcagctct
tttgttctccaagttgtgccaaagctcgtatggcttgacggcaagaaacttgagatttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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