KEGG   Brassica rapa (field mustard): 103873514
Entry
103873514         CDS       T03449                                 
Name
(RefSeq) long chain base biosynthesis protein 2a-like isoform X1
  KO
K00654  serine palmitoyltransferase [EC:2.3.1.50]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00600  Sphingolipid metabolism
brp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    103873514
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:brp01007]
    103873514
Enzymes [BR:brp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.50  serine C-palmitoyltransferase
     103873514
Amino acid related enzymes [BR:brp01007]
 Aminotransferase (transaminase)
  Class II
   103873514
SSDB
Motif
Pfam: Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Aminotran_5 OKR_DC_1 SHMT Cys_Met_Meta_PP
Other DBs
NCBI-GeneID: 103873514
NCBI-ProteinID: XP_009150173
Position
A06:17233818..17239725
AA seq 485 aa
MYFTTISTYLSCCLIIGFGHLRDFFRRILVLLFTNDNLQGYAPICFGHEDFYMRRGYHRV
QDCFARPIASAPDAWFDMVERDWNDGEKVIDRTTKRRRCLNLGSYNYLGFGSFDEYCTPR
VIESLKKFSASTCSSRVDAGTTSVHVELEECVAKYVGKHSAIVFGMGYATNSFIIPVLIG
KGGLIISDSLNHSSIINGARGSGANIRIFQHNKPSHLERILREIAERQTKTHKPWKKIIV
IVEGIYSMEGEICKLPEIVSICKKYKAYVYLDEAHSIGAIGNTGRGVCELLGVNTADVDI
MMGTFSKSFASCGGYIAGSKELIQYLKHHCPGHLYATSISTPSAQQIISAIRVILGEDGS
NRGAQKLARIRENSNYFRSELRNMGFKVLGDVDSPVMPIMLYHPAKIPAFSRECLRENVA
IAVVGFPATPLMLGRARICISASHSKQDLIKALEVISKVGDLTGIKYFPAAPKKQEAEKD
TIKLV
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgtactttaccactatctcaacatatttgagctgctgcttgatcatcggctttggccat
ctccgtgattttttccgtcggatcctcgttttgctattcaccaacgacaatctccaggga
tatgcgccaatctgctttggacacgaggatttctacatgagacgaggatatcatcgggtt
caggactgttttgcccgtccaatagcgagtgcaccagatgcatggtttgatatggtcgag
agagactggaacgatggggaaaaagtgatagatcgaacaacaaagagaagaaggtgcctc
aatttggggtcgtacaattatcttggatttggttcattcgatgaatattgcacgcctcgt
gttattgagtctttaaagaaattttcagcaagtacatgtagttctcgtgttgatgcagga
actactagtgtgcatgtagagcttgaggaatgtgtagctaaatatgtgggaaagcattct
gctattgtctttggcatgggatacgccacaaactcgtttatcattcctgttttgattgga
aagggaggattgataataagtgattctttgaaccatagttcaattattaatggtgctcga
ggttctggagccaatatccgcattttccaacacaacaaaccttctcacttggaaagaata
ctgagagaaatagcggaaagacaaaccaaaacacacaaaccctggaagaaaattattgtt
atcgttgaaggtatttacagcatggaaggggagatttgcaagcttcccgagattgtgtcg
atatgcaagaagtacaaggcatatgtttatttggatgaagctcatagcattggagccatt
gggaatacaggaagaggtgtttgcgaacttcttggagttaatacggctgacgtggacata
atgatgggaaccttcagtaaatcttttgcctcttgtggtggatatattgccggctctaag
gagctcatccaatatttgaagcaccattgcccgggtcatctttacgcaacatcaatttca
actccttccgcacaacaaatcatatcggccataagagttatccttggagaggacggttcc
aacagaggggcacaaaagctagcaagaatacgagagaacagcaattattttaggtctgag
ctacggaatatgggatttaaggtacttggagacgttgattctccagtcatgccaataatg
ctttaccatccagctaaaatcccagccttctctagggaatgcttgcgagaaaatgttgca
atcgccgtggtcggtttcccagctacacctctaatgctaggaagggctcgtatttgcata
tccgcatctcattcaaaacaagatcttattaaagccttagaggttataagcaaagtaggt
gaccttacaggaatcaaatattttcctgcagctccaaagaagcaagaagcggagaaagat
accatcaaactggtttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (7)   
   Pfam (7)   
All databases (42)   

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