KEGG   Brassica rapa (field mustard): 103874426
Entry
103874426         CDS       T03449                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103874426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:brp03009]
    103874426
Ribosome biogenesis [BR:brp03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    103874426
SSDB
Motif
Pfam: RNase_T Phosphodiest ATPaseInh_sub_z
Other DBs
NCBI-GeneID: 103874426
NCBI-ProteinID: XP_009151101
UniProt: M4D062
Position
A06:complement(22545620..22549066)
AA seq 569 aa
MTSSKRKRDAGTAVEDSADGSDKSSTGNSFFDIYGPEAKPELVFKGPETTLNLQDVQGLV
TWVLSEGYMPNWVFIKNKPLIPKVVMLYLPGLDAALYLSQSKALANLKSCCGNPIPLLAL
SCVVDEMKTIDTLLTCKGKKKKNATHSVEPPLLVSKPEACSLVGKSFTEVTKDIPFPVTY
YTLSRKEMEQNGYNFKTEFISTLPAPSGSCPQEILALDCEMCTTKDGSELTRVTLVDIQG
QVLLDKLVKPTNHITDYLTMYSGITAEMMEGVTTTIKDIQEEFLKLVFEETVLVGHSLEN
DLYSLKISHNLVIDTSVLYKHPRSGSHKTKLRVLAKKFLAREIQMSESGHDSVEDAKAAM
DLALMKIKYGPDFGSPPEMMRKKLLDILNESGKTTCIVDSINIVKRYASESSSSVPVSSD
DEALSKAIKEVKKRGSQFVWTQFSELNTHFRNRADDPEKLNTRLAEKISLLTCSDDDSGL
KKRRKSKVSPETKEILKKMDERVSALHAALPTNAMFIVCTGHGDTSVVHRVRKMLKDEGV
AFSREKVVKVLEELQAQAEVALCFVGIKQ
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgacgtcctcgaagcgaaagcgcgacgccggaaccgccgtggaagatagtgctgacggt
agcgacaagagcagtactgggaacagtttcttcgatatatatggacctgaagccaaacca
gaactcgttttcaagggtcccgaaacaacattgaacttacaagatgttcaaggacttgtg
acatgggttctttcagaaggctacatgcccaattgggttttcatcaagaacaagcctcta
attccaaaggttgtcatgctctaccttcctggattggatgcagctttatacttatcacag
tctaaggcacttgctaatttgaaatcatgttgtggcaatcctattccgcttttagctttg
agctgtgtagttgatgagatgaagacgatcgataccctccttacttgcaagggtaaaaag
aagaaaaatgctactcattcagtggaaccacctctcctagtatctaagccagaagcatgc
agtctggtgggtaaatcgttcactgaggtgacgaaagatataccattccctgttacatac
tatactctaagtcgaaaggaaatggaacaaaacggatacaattttaagacagagtttatt
tctacacttcctgcaccatcaggatcatgtccccaggaaattttggctcttgattgcgag
atgtgtactacaaaggatggttcggagttgacaagagtgacgctagtggatatccaagga
caggttctattagataaattagtcaagccaacaaatcatatcacggattaccttacaatg
tatagtggaataacagctgagatgatggagggagtaacaacaactattaaagacattcag
gaagagttcttaaagctggttttcgaagagacagtattagtcggacactcattggaaaat
gacttatattctctgaaaatctctcataacctggtgattgacacttcagtgctatacaag
catccacggtctgggtctcataaaacaaaactccgagttttagcgaaaaagtttcttgct
agagagatacagatgtctgaatctggacatgacagcgtcgaggatgcaaaggcggccatg
gatttggcactaatgaagataaaatatggacctgactttggttcaccgccggagatgatg
agaaagaagctcctcgacattttaaacgagagcgggaaaaccacttgtattgtagacagt
atcaacattgtaaagagatatgcttctgagtcatcaagttcagttccagtttcttctgat
gacgaagcactttcaaaggccataaaggaggtaaagaagaggggatcacaattcgtttgg
acacaattctcagaactaaatacacatttccggaacagagcagatgatccagagaaacta
aacactagactagcagagaagatctcgttgctgacatgtagcgatgatgattcaggcctc
aagaaacgccgcaaaagcaaggtttcacctgaaacgaaggaaatcttaaagaagatggat
gaaagagtcagtgcccttcacgctgcattaccaacaaatgcaatgtttatagtttgtacc
ggacatggagacacatcagttgtacacagagtgcggaaaatgcttaaagacgagggtgtt
gcgtttagccgtgagaaagttgtgaaggttcttgaagagcttcaggcacaagccgaagta
gcgctctgttttgtaggtatcaagcaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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