KEGG   Phocaeicola salanitronis: Bacsa_2519
Entry
Bacsa_2519        CDS       T01433                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bsa  Phocaeicola salanitronis
Pathway
bsa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Bacsa_2519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsa03021]
    Bacsa_2519
   03400 DNA repair and recombination proteins [BR:bsa03400]
    Bacsa_2519
Enzymes [BR:bsa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Bacsa_2519
Transcription machinery [BR:bsa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Bacsa_2519
DNA repair and recombination proteins [BR:bsa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Bacsa_2519
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C
Other DBs
NCBI-ProteinID: ADY37057
UniProt: F0R8V8
Position
2928075..2932361
AA seq 1428 aa
MAFRKDTKIKSNFSKITIGLASPEEILENSYGEVLKPETINYRTYKPERDGLFCERIFGP
VKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERSGHIQLVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDAVIYYERYIVIQPGVKAEDGVNQYDLLSEEEYLDIMDTLPKDNQYLED
TDPNKFIAKMGAEAIYDLLVRLDLDALSYELRHKANNDSSQQRKNEALKRLQVVESFRAS
RGRNKPEWMIVRIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAP
EVILRNEKRMLQEAVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQNLLGKRVD
YSARSVIVVGPELKMGECGIPKLMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEPVI
WDILEHVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLACTAFNADFDGDQMAV
HLPLSNEAVLEAQLLMLQSHNILNPANGAPITVPAQDMVLGLYYITKIRKGAKGEGLIFY
GPEEALIAYNEGKVDIHAEISVLTNDLDENGNIVKKMIKETSVGRIIVNELVPDECGYLN
MIISKKSLRDIISDVIKKVGVARACEFLDGIKNLGYQKAFEGGLSFNLGDIIIPKEKEEL
IKRGNEEVEQIMMNYNMGFITDNERYNQVIDTWTHVNSDLSDILYKTIKNDDQGFNSVFM
MLDSGARGSKEQIRQLSGMRGLMAKPQKAGAEGAQIIENPILSNFKEGLSVLEYFISTHG
ARKGLADTALKTADAGYLTRRLVDVSHDVIINEEDCGTLRGLVCTALKNNDEVIATLYER
ILGRVSVHDVIHPTTGKLIVASGEEITESIAEEIENSPIESVEIRSVLTCESKKGVCAKC
YGRNLATSRMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGIAGNMAANASIVAKNDARL
EFEELRTVDAVEETGEPVKIVVGRLAEVRFIDVNTGIVLSTHYVPYGSKLYASDGEVVEK
GKLIAKWDPFNAVIVTEVAGKIAFESVIENVTYKVESDEATGLREIIITESKDKNKIPSL
HILDENGNEIRTYNLPVGGHVVVEDKQIVKAGDILVKIPRAVGKAGDITGGLPRVTELFE
ARNPSNPAVVSEIDGEITMGKIKRGNREIIVTSKTGDVKKYLVALSKQILVQDNDYVRAG
TPLSDGAITPADILAIKGPTAVQEYIVNEIQDVYRLQGVKINDKHFEIIVRQMMRKVQID
EPGDTRFLEQQVVDRLEFNEENDRIWGKKVVVDAGDSQNLQPGQIVTARKLRDENSMLKR
RDLKPVEVRDAVPATSTQILQGITRAALQTSSFMSAASFQETTKVLNEAAINGKVDRLEG
MKENVICGHLIPAGTGQREFDKIIVGSKEEYDRILANKKNVLDYNEVE
NT seq 4287 nt   +upstreamnt  +downstreamnt
atggcttttagaaaagatactaagataaaaagtaatttctcgaagattacgatcggattg
gcgtcacctgaggaaatcttggaaaactcgtatggtgaagtgctgaagccggaaactatc
aattaccgtacttataagccggaacgtgacggtttgttttgcgaacgcattttcggtccg
gtgaaagactatgaatgccattgcggtaaatacaaacgtatccgttataaaggaatcgtc
tgcgaccggtgtggtgtagaagtgacagaaaagaaagtgcgtcgtgaacgtagcgggcat
atacagctggtagttcctgttgcacatatctggtatttccgttctttgccgaataaaata
ggttatttgttaggcttgcctaccaaaaagctggatgctgttatttattacgaacgttac
atcgtgattcagccgggtgtaaaagctgaagacggtgtcaatcaatatgatttgttgtct
gaagaagaatatcttgacattatggatacgcttccgaaggacaaccaatacttggaagat
accgacccgaacaagttcatcgccaagatgggtgcggaagctatctacgacttgctggta
cgtctggatttggatgcgctttcatacgagctgcgtcataaggcaaacaatgactcttcg
cagcagcgcaagaacgaggctttgaagcgtctgcaggtagtagaatcattccgtgcgtct
cgtggacgtaacaagccggaatggatgattgtacgtatcgtgccggttatcccgcccgaa
cttcgtccgctggttccgctggacggtggccgtttcgctacgtccgacctgaatgacttg
taccgtcgtgtgattatccgtaacaatcgtctgaaacgattgattgaaatcaaggctccg
gaagttatcttgcgtaacgaaaaacgtatgttgcaggaagctgttgattcgttgttcgat
aattcacgtaagtcgagtgctgtgaagacggatgccaaccgtccgttgaaatcattgtcc
gacagcttgaaaggaaagcaaggacgtttccgtcagaacctgttgggtaagcgtgtcgac
tattctgcccgttcggttatcgtcgttggtccggaattgaagatgggcgaatgcggtatt
ccgaaactgatggctgccgaactgtacaagccgtttatcattcgcaagctgattgaacgc
ggtatcgtgaagaccgtgaagtctgcaaagaagattgtagaccgcaaggagccggttatc
tgggatatcctggaacatgtaatgaaaggccatccggtattgttgaaccgtgcgccgaca
ttgcaccgtttgggtattcaggcattccagccgaagatgatcgaaggaaaggctatccaa
ttgcacccgttggcttgtacggcgttcaatgccgacttcgacggtgaccagatggctgtt
cacttgcctctgagcaacgaagctgtactggaagcgcaattgctgatgcttcaatcgcac
aatatcttgaatccggctaatggtgcgccgattaccgtgcctgcacaggatatggtattg
ggattgtattacattaccaagatacgtaaaggggctaaaggtgaaggactgattttctac
ggaccggaagaagccttgattgcttataacgaaggtaaggtagacatccacgccgaaatc
agcgttttgacgaatgatttggatgaaaacggcaatatcgtcaagaagatgattaaagag
acatctgtcggacgtattattgtcaatgaactggttccggacgaatgcggatacctgaac
atgattatttctaagaaatcattgcgcgatatcattagtgatgtaatcaagaaagtgggt
gtggctcgtgcttgcgaattcttggatggtatcaagaatttgggatatcaaaaggcattc
gaaggcggattgtcattcaacttgggcgatatcatcattccgaaggagaaagaagaactg
attaagcgtggtaatgaggaagtggaacaaatcatgatgaactataacatgggtttcatt
accgacaacgaacgttataatcaggttatcgatacatggacacatgtcaacagcgacttg
tccgacatcttgtataagacgattaagaacgatgaccaagggttcaactctgtattcatg
atgttggattccggtgcccgtggttctaaggaacagattcgtcagttgtctggtatgcgt
ggtttgatggcgaagccgcagaaggcaggtgccgaaggcgcacagattattgaaaacccg
attctttcgaactttaaggaaggtctttcggtgttggagtactttatctctacccacggt
gcccgtaaaggtcttgccgataccgcgttgaagacagccgatgccggatacctgacccgt
cgtctggttgacgtgtcacacgatgtgattatcaatgaagaagactgcggtaccttgcgc
ggactggtttgcacggcattgaagaacaacgatgaagttatcgctacgctgtacgaacgc
atcttgggacgtgtgtcggtacacgatgtgattcatcctacgaccggaaagctgattgta
gcttcgggcgaagagattaccgaaagcattgccgaggaaatcgaaaactctccgatagaa
agcgtggaaatccgttcggtattgacgtgcgaatcgaagaaaggtgtctgtgcgaagtgt
tacggacgtaaccttgctaccagccgtatggttcagaaaggtgaagcggtcggagtcatt
gccgcacagtctattggtgagccgggtactcagttgacattgcgtaccttccatgccggt
ggtattgccggtaacatggcagccaatgcaagcatcgtggcaaagaatgacgcgcgtctg
gaattcgaagaactgcgtacggtagatgctgtagaagaaaccggcgaaccggtgaagatt
gtggtaggccgtttggcggaagtccggtttattgatgtcaatacgggcattgtattgtct
acccactatgtaccatacggttctaagctgtatgcttcagacggtgaagtggtagagaag
ggcaagctgattgccaagtgggacccgttcaatgccgttatcgtaaccgaggttgcaggt
aagattgcattcgagtcggttatcgagaatgtaacgtataaggtagaatcggatgaggct
accggtttgcgtgaaatcatcattacagagtcgaaagacaagaacaagataccttcattg
catatccttgatgaaaatggcaatgaaatccgtacgtacaacttgccggtaggcggacac
gtggtagtagaagacaagcaaatcgtgaaggcgggtgatattctggtgaagattccgcgt
gccgtaggtaaggcgggcgatatcaccggtggtttgcctcgtgtgacagagttgttcgag
gcacgtaatccgtccaatcctgctgtggtatctgaaatcgacggtgagattaccatgggt
aagatcaaacgtggtaaccgtgaaatcattgtgacttcaaagaccggtgatgtgaagaag
tatctggtagcattgtccaagcagattctggtacaggataatgactatgtacgtgccggt
actccgttgtccgacggcgccattacgcctgccgatatcctggcgattaaaggtcctacg
gctgtacaggaatacatcgttaatgaaatccaggacgtttatcgtctgcagggtgtgaag
attaacgataagcacttcgagattatcgtacgccagatgatgcgcaaggtacagattgac
gagccgggagatacccgtttcttggagcaacaggtggtagaccgtctggaattcaatgaa
gagaacgaccgtatctggggcaagaaagttgtggttgacgcaggtgattcgcagaacctc
cagccggggcagattgttacggcacgtaagttgcgtgacgagaacagtatgctgaaacgc
cgcgacctgaaaccggtggaagtacgtgatgctgttccggcaacttctacgcagattctg
caaggtattacccgtgccgcattgcagacttccagcttcatgtcggcagcatccttccag
gaaacgacgaaggtgctcaacgaagcggctatcaacggtaaggtagaccgtctggaaggt
atgaaggagaatgtgatttgcggtcacttgattcctgcaggtaccggacagcgcgagttc
gacaagattatcgtaggctcgaaagaggaatacgaccgtatccttgccaacaagaagaat
gtgcttgactataacgaagtagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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