KEGG   Bipolaris sorokiniana: COCSADRAFT_76422
Entry
COCSADRAFT_76422  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K14301  nuclear pore complex protein Nup107
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSADRAFT_76422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsc03019]
    COCSADRAFT_76422
   03036 Chromosome and associated proteins [BR:bsc03036]
    COCSADRAFT_76422
Messenger RNA biogenesis [BR:bsc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     COCSADRAFT_76422
Chromosome and associated proteins [BR:bsc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    COCSADRAFT_76422
SSDB
Motif
Pfam: Nup84_Nup100 EF-hand_like MRP-S27
Other DBs
NCBI-GeneID: 19140564
NCBI-ProteinID: XP_007694850
JGI: Cocsa1_76422
UniProt: M2TK59
Position
Unknown
AA seq 1029 aa
MALRPFSRQSQSTAAQSPNSNALFFGASRPTNGTTSNDPLQPLRAMADRVGKEVEKFAER
VDHWHTHGNDSKRAKYHTTVKLVGKFQDVAESHVKELKRTAEAENKGSLSKTIRRQIQSM
ADASENAPQSLFAQSSQSVNSSIENNTAPVSANIQELREWQAELATWKLLKLVIEHYHPD
PDTDVAAEKKARLETAGGTARYCKNSEIWDRFILEDDQAKEKALILRWLEQTARDSESDV
KAITTALEEHSGKGAHTWTSGWLDTKAKIKQAKRMEGAEQPLKPTNTNIQTSDKTANLVT
QLDPDAPSRQKRALEKNDEYYERSLWMVAYEMMRRGLPWTTIVNWCYERNESWRGVSIGA
AYESHPEGGPNVAGPTVGYLFRRMCFYAARGARIPYEGAVYGLLSGDLKQVQAVCRSWDD
HLYAHYNALLLSRFDMYLQRNYPTKVTESLTQKFLFQDAVANIGDWEASPEKVIGILKQQ
RSTASQAVSPIKLIQGALIGRDADDLMLKVGMALADMFAQDKRPHSLIIHPDSQEEDRSP
MPAGEYRTFEAERYYQNLVKDPHAFRILVHIFIVLRNGLHTLFEDTQHDKQFLTMDNVIA
AYIEFLRLTQRFDAIPLYAAQLIEERAAYTLARVLPDIKNSTEQRHCVALMESYRLDVIQ
VVSQSFTFAARDSGFTHFNSAGITVITNPIKRFKILEPVSVPHEQVLWPGVRIKRSFDGE
QISEQDEIIVDALQWYNYIGKDYEHTFEHLNNALTIFLLNGRLAAAEKVIDDLSVESLSL
SRTEALTGYPFDMMASGAEEQDERQLHEHRDSLSAAARAAAIPISQLPDANQHRELVMQL
RQASLPYYNLQQIVRLLVLFREWREEEQALIQIRADRQKETTGAKAKPDTQHTKALLDSI
STIFDTLLPSISLYSAADPHYLTEQTWDLLKAYIPDMVLAYLSVLQSASWFLNKDPAIKA
MEVAVVIADKSNEWLQRCLLETGRMSEVLECLAGVSKCMLKLTEGGKEKGNKKRGGKGET
LRIWDLGAR
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggcgttacgacccttctcgcgccagtcgcagtcgactgcagcacagtcaccgaatagt
aatgcgcttttttttggcgcttcccgaccaacaaatggcaccacctcaaacgatccgctc
caaccactgcgcgcaatggccgaccgcgtgggcaaagaagttgagaagtttgcagagcga
gtcgaccactggcatacacacggaaacgactcgaagagggccaagtaccacaccacggtc
aagttggtgggcaaattccaggatgtcgcagaatctcatgtcaaggagctgaagcgaaca
gccgaagcagagaacaagggcagtctgagcaaaactatccggcggcagatacagagcatg
gcagatgcgtcggagaatgcgccccagagcctcttcgctcagtcatcccaatccgtcaat
tcgtcgattgagaacaacaccgcccctgtttccgcaaacatccaggagcttcgagaatgg
caggccgagcttgcgacatggaaactactcaagctcgtcatcgaacactaccaccccgac
cccgataccgatgtggctgcagagaagaaggcgcgtttggaaactgctggaggcactgca
cggtactgcaagaatagcgagatttgggaccggttcatactggaggatgaccaggcgaaa
gagaaggctcttattcttcgctggttagagcagactgcacgagatagcgaaagtgatgtc
aaggccattactacagcactcgaggagcattcgggcaagggtgcgcatacatggacaagt
ggctggctcgacaccaaggccaagatcaagcaggcgaagcgtatggagggtgccgaacag
ccattaaagcccaccaacacaaacatccagacctcggacaagaccgcgaaccttgttact
cagctcgacccagacgctccctctaggcagaagcgtgcgcttgaaaagaacgacgagtac
tacgagcgttccctttggatggtcgcatacgagatgatgcgccgtggactgccgtggacg
accattgtcaactggtgctatgaacgaaacgaatcctggcgcggagtcagcattggagca
gcatatgagagtcaccctgaaggtggtcctaatgttgccgggccaactgttggctatctg
ttccgccgcatgtgtttctacgctgcgaggggggcacggataccttacgagggcgcagta
tacggtctgttgagtggagacttgaagcaagtgcaagcagtctgccgatcttgggacgac
catctttatgcgcattacaacgccctccttctttcccggttcgatatgtacctccaaagg
aactaccctaccaaggtgacggagagcctgacccaaaagttccttttccaggatgctgta
gccaacattggagattgggaggcttcgcccgagaaggtcattggtatattaaagcagcag
aggagtaccgccagccaagccgtctcaccgatcaagctcattcaaggcgcgcttatcggc
agagatgctgacgatctgatgctgaaagttggcatggccttagcagatatgtttgctcaa
gacaagcgacctcacagcctcatcatacacccagattcacaagaggaagaccgatcacct
atgccagcgggagaataccggacctttgaagcggagcgatactaccagaaccttgtaaaa
gatccccacgctttccgaatcttggtgcacatcttcattgtcctccgtaatggacttcat
acactctttgaggatactcaacatgacaagcaattcctaactatggacaacgttatcgct
gcctacattgagttcctgcgccttactcaacgtttcgatgccatcccgctttacgcggcg
cagctgatcgaagagcgtgcggcatataccctagcacgcgtccttcccgacatcaaaaac
agcactgagcagcggcactgcgttgcgcttatggaatcatatcgactcgatgttatccag
gtcgtgtctcagagctttacgtttgctgcacgggatagtggattcacccactttaacagt
gcaggtatcacagtcatcacaaatcccatcaagcgtttcaagattttggagccggtcagc
gtacctcatgagcaagtcctgtggcctggtgtgcgtataaagcggtcattcgatggggag
caaattagcgagcaagacgagattattgttgatgctttgcaatggtacaactacattggc
aaggattacgaacacacatttgagcacctcaataatgcgctaaccatcttccttctcaac
ggtcgcctagctgctgccgagaaggtcattgatgatctcagcgtcgagtctctgtcgctg
tcgcgtacagaagcccttactggttatcctttcgatatgatggcttctggagcagaagag
caagatgagcgtcaactccatgagcatcgggatagtctctcagccgctgcacgagctgct
gcaattcctatttcacaattacctgatgccaaccagcacagggaattggtgatgcaattg
cgccaggccagcttgccatactacaatctccagcaaatcgttcgcctgctcgtccttttc
cgcgaatggcgcgaggaggagcaagcactcatacagatccgtgcggaccgtcagaaagag
accaccggcgcgaaagcaaaaccagacactcaacatacgaaggctcttctagactccatt
tccaccatctttgacaccctcctaccctcgatctctctttattctgctgccgaccctcac
tacttgacagagcaaacgtgggatctcctcaaggcttacattcccgacatggttcttgcc
tatctctccgttctccagtctgcatcgtggttcttgaacaaggaccccgctatcaaggcc
atggaggttgccgttgtcatagccgacaagagtaacgagtggctgcaacgctgtctgcta
gaaactggcaggatgagtgaggtattggagtgcttggctggtgtatccaagtgcatgttg
aaactcaccgaaggcggcaaggagaagggtaataagaagcgagggggtaagggagagacg
ctgaggatatgggatttgggtgctagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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