KEGG   Bipolaris sorokiniana: COCSADRAFT_90090
Entry
COCSADRAFT_90090  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    COCSADRAFT_90090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bsc03009]
    COCSADRAFT_90090
   03016 Transfer RNA biogenesis [BR:bsc03016]
    COCSADRAFT_90090
   03029 Mitochondrial biogenesis [BR:bsc03029]
    COCSADRAFT_90090
Enzymes [BR:bsc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     COCSADRAFT_90090
Ribosome biogenesis [BR:bsc03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     COCSADRAFT_90090
Transfer RNA biogenesis [BR:bsc03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    COCSADRAFT_90090
Mitochondrial biogenesis [BR:bsc03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    COCSADRAFT_90090
SSDB
Motif
Pfam: POP1_N POPLD Sgf11
Other DBs
NCBI-GeneID: 19141334
NCBI-ProteinID: XP_007700033
JGI: Cocsa1_90090
UniProt: M2T4J4
Position
Unknown
AA seq 1262 aa
MADNAKKRKHASTTGPANAPKRARFPQRPQHVIPATPTSNAYPNGEINVANFLKSHENEI
KSLEGAIKVAKNALSRRAFQDVPRELRRRTASHNPTRVPKRLRQRARQEAKDDNTPISRG
TSGSGMGKGKKKHLRNESREKSRQNWEKRAKKRKQGNPTATHTQDHDGDTAMDPPHADTP
KPAPPPKTKSKRIFPALATPHTPPSRFRRRQRDKTWLPTHLWHTKRARMTDPKEPLWRFA
LPLQPAAKAYRLTHRAATQRGAVAWDMSYMSTISLQGPNASLTGLLKGLHFGAEDAEDPW
QNRGRAKKWRHGTRTWEGWIHEREDMRLKRIAHVTIVWCVPESEKDKRRAFIRVHPSAFL
TLWNEVIRAAKVQKPPVIVRDARFEIGSIEIMGPAAAETLCSVLHPISSSSDTDTGTPQS
LWSMLALVTDVASLPAGALLAFDITDPRLRDPPSTTPTAQDQHSIAILTEALAAWPVDQT
QKAAAVFNTDARLAAQRTMPSQKSINRRKSACTLGEDLEARPTDPKIPALVFTSRESRSW
TILLPWKCVMPIWRQMMRYPVSTGGNPRFGGLKERRQVDFERSVPHFPYDFPSTDAGWAW
ELHARQGRKLEWTKRPKGKRIEWTTIDLGNGRKGEVGEPWACEWLLLLPSTRKTADFSHQ
RSEEGYTPLRQLSSVQAKKLVDGHLLVDSRLLSTCVFAVKITMVQRGTPTECARIYRLPA
DAELRSKWVSLIPLGENKRIPNKKGSQPSDVKPSGNPKRQLARRLLEPPKLDQGPPKAGE
EDYPLVPDEGDLVGFVTTGNYNLAEGMPTAVANLAVGRMLSLVGAQGISPSDPTERESAR
DMSEDRLADDQAEGIASAVGLPSDALAELTTDILDELLSNIVYSTALSCHRSEKLLRMQS
AATQAESIALANLEPQSQKQNTNGAITIPIAETLAAKYENGRVFLKGNPLKTTPEIICPH
CKLPRLMYPIMGKSMQNPDLTKEYCMLYPWVQRSGHDVYGNPFPTDMAKSKKERELIKQQ
QKNAEKESVGTPGSQDTDMAGGDTKEIKLNTGGKPASYIPWHTCPNCKRSLLITRFAQHL
EKCLGISGRQSSRNAMAKLVGQNGSGSGVGNTPLGSRMGTPAPGSQDAPAPKTSSKSKGI
SPTKKLAAGDDADADELGLDNDTPERRKIKKKSSYIKKADRDRSTNGSGGTLKVKLKTGS
RPDLDRKHSENSERGEGKRDRDADDGGDSPKKKKIKLSLGGGGKDRNRMSASVEPANAAS
PE
NT seq 3789 nt   +upstreamnt  +downstreamnt
atggcagacaacgcgaagaagaggaagcacgcttctaccacaggccccgccaatgctccc
aaacgcgcccgctttccccagagaccccagcatgtcatccccgcgacgcccaccagcaac
gcgtatcccaatggcgaaatcaacgttgcaaattttctcaagtcgcacgaaaacgaaatc
aagtcgctggaaggcgccatcaaagtagccaagaacgccctgtcacggcgcgctttccaa
gatgtccccagagagttgcgcaggagaactgcgagccacaatcccacccgtgtgcccaag
agactgcgacaacgggcgcggcaggaggccaaggatgacaatacccccatctcaagaggc
accagcggtagcggtatgggcaagggcaagaagaagcatctgcgcaatgagagtcgggag
aaaagcaggcagaactgggagaagcgggcaaagaagaggaaacaaggcaatcccacagca
acccacacccaggaccacgatggagacaccgccatggaccctccccatgcagacacccca
aaaccagcacctcctccaaagacgaagtcgaaacgcatattccccgcactcgcgactcct
catactcctccctcgcgattccgtagacggcagagagacaagacatggctgcctacacat
ctgtggcataccaagcgcgcaagaatgacagaccccaaagagcctctgtggcggtttgcc
ctccctctgcagccagccgccaaggcataccgtcttactcaccgagctgcaactcagcgc
ggggccgtggcctgggacatgagctacatgtccactatcagtctccaaggccccaatgcc
agtcttacaggcctgttgaagggactacactttggcgcagaagatgcagaggatccatgg
cagaacagagggagagcgaagaagtggaggcatggcaccaggacttgggaaggctggata
cacgaaagagaggatatgcgtctaaagaggattgcccacgtcaccatcgtctggtgtgtg
cccgagtcggagaaagacaaaaggagggcattcattcgtgtgcatccgagtgctttcttg
accctctggaatgaagtcatcagggctgccaaagtacagaagccaccagttatcgttcgg
gatgcccgcttcgagattggctccatcgagatcatgggtcctgctgcagcagaaactctc
tgttctgtacttcaccccatatcatcttcttctgacacagatactggtactccacaatca
ctgtggtctatgctagctctagtaacagatgttgcttcgctgccagcgggcgcattgttg
gcatttgacataacagaccctcggctccgcgatcctccttccactacaccaacagcacaa
gatcaacactccatagcgattctgaccgaagcactagcagcctggccagtcgaccagacg
caaaaggccgcggcagtattcaacacggacgccaggctggccgcccagcgaaccatgcca
tctcaaaaatctatcaatcgccgaaaaagtgcatgcacacttggcgaagaccttgaggcg
cgcccgacggacccaaaaatacctgcgctcgtatttacgtcacgagagagcaggtcttgg
acgatactgcttccgtggaaatgtgttatgccgatatggcgacagatgatgcgctatccg
gtctcgacgggcggaaacccgcggttcggcggcttgaaagagcgacgtcaagtcgacttt
gagcgatcagtaccgcattttccctacgattttcccagtacagatgctggctgggcctgg
gaactgcatgcgcgacaagggaggaagcttgaatggacaaagcgcccaaagggtaagcgg
atagagtggaccaccattgatcttggtaatggcaggaaaggtgaagtgggagagccctgg
gcttgtgaatggttgctactcttgccatcaacgcgtaagactgccgacttctcacatcag
cggtcagaggaagggtatactccgctgcgtcagctgtcgtctgttcaggccaaaaagctc
gtggatggccatcttttggttgacagccggttactatcaacctgcgtcttcgctgtaaag
atcacaatggtacaacgtggtactccaacagaatgcgcccgcatctaccggctgccagca
gatgcagagctgcgaagcaaatgggtgtcgctaatcccacttggtgaaaacaagcgcata
ccaaacaagaaaggatctcagcctagcgatgtcaagcctagtggtaatccgaaaaggcag
cttgcaagaagactactcgagccgccaaaattagaccagggcccgcccaaagctggtgag
gaggattaccccttggttcccgacgagggggacctggttggctttgtcaccacaggcaac
tacaacctcgcagagggcatgccgactgctgtagccaacctggctgtgggcaggatgctg
agccttgtgggggcacaagggatatcgccgtcggatccgacagagcgagagagcgcgcgc
gacatgtctgaggaccggctggcagacgaccaggccgagggcatcgcctctgccgtcgga
ctgccgtcggacgcgctggcagaactgacaacggatatattggacgaactgctgagcaac
atcgtttatagcaccgcgctatcatgtcaccggtccgagaagctgctccgcatgcagtcg
gctgcaacccaggccgaatcaatcgccctcgccaacctcgagccgcagtcgcagaagcaa
aacaccaacggcgccataacaattcccatcgcagagactctagcagcgaaatatgagaat
gggcgcgtatttctcaaggggaatccgctcaagacgacgcctgagataatatgtccgcat
tgcaagctaccgcgcctcatgtatcccatcatgggcaaaagtatgcagaaccccgatctg
accaaggagtactgtatgctctacccctgggtacagaggtcgggtcacgatgtctacggc
aacccgtttcctaccgacatggccaagagcaagaaggagcgcgagcttattaagcagcag
caaaagaatgctgagaaggagagcgtcggcacacccggatcgcaagacacagacatggct
ggtggcgacaccaaggaaatcaagctcaacacgggcggtaagccagcctcatatattccg
tggcacacctgtccaaactgtaagcgtagtttgctcatcacgcgattcgcacaacacttg
gaaaagtgcttgggtataagcgggcgacagagttcacggaacgcaatggcaaagcttgtg
ggtcaaaatggctcaggttcgggtgttggcaatacgccactcggaagccgaatgggcaca
cccgcacccggttcccaggacgccccagctccaaaaaccagcagcaaatccaaaggcatc
tcgcctaccaagaaactcgctgccggcgacgatgcagacgcagacgaactcggcctagac
aacgacacgcccgagcgtcgcaagatcaaaaagaagagctcatatatcaagaaggccgac
cgagatagatctacaaacggtagcggtggcaccctcaaagtcaaactcaagacaggtagc
aggccagatctcgaccgaaagcacagcgaaaacagcgagaggggcgagggcaagagagac
cgcgacgcagacgacggcggcgattcgcctaagaagaagaagatcaaactcagcttaggt
ggcggcggcaaagacaggaataggatgagtgctagcgtggagccggcgaatgctgcgtcg
cccgagtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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