KEGG   Bifidobacterium scardovii: BBSC_0887
Entry
BBSC_0887         CDS       T03975                                 
Name
(GenBank) ABC transporter permease and ATP-binding components
  KO
K18887  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
bsca  Bifidobacterium scardovii
Pathway
bsca02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:bsca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    BBSC_0887
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bsca02000]
    BBSC_0887
Transporters [BR:bsca02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    BBSC_0887
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N AAA_16 AAA_29 AAA_25 AAA_22 DUF87
Other DBs
NCBI-ProteinID: BAQ30967
Position
1056742..1058538
AA seq 598 aa
MGLIFRYMRRHWAMALTAVSFLSIETVADLLQPTLMSMVVDDGVANRDLNRVLMWGAMML
AVAAVGALGAVTRNIFASRAAQLIGRDIRSDAYRTVMSLSCDQVDRLQPGAIITRITNDV
VQIQNFAQGLMRIMLKAPITCVGAIVLIVVQVPGQLPVVIMLLAVSGVLIWRNMAASFPR
FLAVQHALDRLGTVSREFLRSVRVVKAFGMEREESGRFGTSAGDFAQANIAAQRVNAVYG
PLINLTVNLGIVALLWLSRATDPGRIGALMASMNYMTQVLFALGRVSMILNSAVRASASA
RRIQEIFDQPAASDAAAGTQADPARDSRPSGGPDDGHGDGTGSGLRFDHVTFAYANSPRP
ALTDVSLAVPEGGTLGVIGPTGSGKSTLVSLLPRFYAPQSGHILWNGRDIAGMDVERLRA
DIALVPQKPVLFTGSVRSNLLWGDPDAGDERLERACRESCADEFVRELPGGYGAPIGQGG
VNLSGGQKQRLSLARALIRTPRMLILDDCTSALDAITERRVLDHVAALRGLTVLLISQRI
ATVRRCDRIAVMHGGRIAAVGTHAELMAACPQYQAIYASQVGVVRRAPAQSDGKEAVR
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgggactcatctttcggtatatgcgcaggcattgggccatggccctgaccgcggtctcg
ttcctgagcatcgagaccgtggccgacctgctgcagcccacgctgatgtcgatggtggtg
gatgacggcgtggcgaaccgcgacctgaaccgggtgctcatgtggggagcgatgatgctc
gccgtcgcggccgttggcgcgttgggtgcggtcacgcgcaacatcttcgcctcccgcgcc
gcccagctcatcggccgcgacatccgttccgacgcctaccgcacggtcatgtccctgagc
tgcgatcaggtggatcgcctgcaacccggcgccatcatcacgcgcatcaccaacgatgtg
gtgcagatccagaacttcgcccaaggcctgatgcgcatcatgctcaaggcgccgatcacc
tgcgtcggcgcgatcgtgctgatcgtggtgcaggttcccgggcagctgccggtcgtcatc
atgctgcttgcggtgtcgggcgtgctcatctggcgcaacatggccgccagcttcccgcgg
ttcctcgccgtgcagcacgcgctcgaccggctcggcaccgtcagccgcgaattccttcgc
tcggtgcgcgtggtcaaggccttcggcatggaacgggaggagtcgggccgattcgggacc
tccgccggcgatttcgcgcaggcgaacatcgccgcccagcgggtgaacgccgtatacggt
ccgctgatcaacctgacggtgaacctcggcatcgtcgcgctgctgtggctgtcgcgggcc
accgatccggggcgcatcggcgcgctgatggcctccatgaactacatgacgcaggtgctg
ttcgccttggggcgcgtgtcgatgatcctgaattcggcggtcagggccagcgcgtcggcc
cggcgcatccaggagatcttcgaccagccggccgcctccgatgcggctgccggcacgcag
gccgatccggcgcgggactcccgcccgagcggcggcccggacgacggccacggcgatggc
accggctccggactgcggttcgaccatgtcaccttcgcgtatgcgaacagcccgcgcccg
gccctgaccgatgtcagcctcgccgtgcccgaaggcggcacgctgggcgtcatcggcccg
accggttccggcaagtccacgctggtctcgctgctgccgcgcttctacgcgccgcaatcc
gggcacatcctgtggaatggccgtgacatcgccggcatggacgtcgaacggctgcgcgcg
gacatcgcgctcgtgccgcaaaaacccgtgctgttcaccggaagcgtgcggtcgaatctc
ctgtggggcgacccggacgcgggcgacgagcggctcgagcgggcctgccgggaatcctgc
gccgacgaattcgtgcgcgaactgccgggcgggtacggcgccccgatcggtcagggcggc
gtgaatctgtccggaggccagaagcagcggctaagtctggcccgcgcgctgatccgcacg
ccgcgcatgctgatcctcgacgactgcaccagcgcgctcgacgccatcaccgaacggcgg
gtgctcgaccatgtggccgcgctacgcgggctcaccgtgctgctcatctcccaacgcatc
gccacggttcgccggtgcgatcgcatcgcggtcatgcatggcgggcgtatcgcggcggtc
ggcacccatgccgagctcatggccgcctgcccgcaatatcaggcgatctacgcctcgcag
gtcggcgtcgtccggcgtgcgcccgcgcaatccgatggcaaggaggccgtgcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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