KEGG   Blastococcus saxobsidens: BLASA_3278
Entry
BLASA_3278        CDS       T01752                                 
Name
(GenBank) Ribonuclease D (modular protein)
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
bsd  Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:bsd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bsd03016]
    BLASA_3278
Enzymes [BR:bsd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BLASA_3278
Transfer RNA biogenesis [BR:bsd03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BLASA_3278
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: CCG04146
UniProt: H6RR66
Position
3151765..3153096
AA seq 443 aa
MLLVPGSAGCVTADRGRARGPTDENRQEGGRQLSTEPTPQPPDDVPEAIPLLAPRDGLPP
VIETSTQLVEYAAALRAGTGPVAVDAERASGYRYGQKAYLVQLRRNGSGTGLVDPVPLPD
LSVIQQAIADTEWVLHAANQDLPCLAEIGLVPARIFDTELAARLAGLPRVGLGAVVESLL
GYSLQKGHSAADWSTRPLPEEWLVYAALDVEVLVDLRDALAAILGEQGKTEWARQEFEAI
LAAGPPAPKQDPWRRTSGVHGLRSRRQLGMLRAIWEARDDLARRRDIAPGRVLPDSAMVA
AVQADPKNEGALLELPVFRGRANRRMVAHWFTALARGKAQPDDELPLHSKPGDGPPPVNR
WADRDPAAAARLQVARAGLAELSEKHAVPVENIVSPDLVRRIMWSPPRPRDAAAVTDALR
DGGAREWQIELTLDVLTDAIGRD
NT seq 1332 nt   +upstreamnt  +downstreamnt
gtgctcctcgtcccgggatccgcaggctgcgtcacggcggaccgcggccgagcgcgtgga
ccgacagacgagaaccggcaagaaggtggacggcaactgagcaccgagcccactccccag
ccgccggacgacgtacccgaggcgatcccgctgctcgccccccgggacgggcttccgccg
gtcatcgagacctccacccagctggtggagtacgccgcggcgctccgcgcgggcaccggc
ccggtcgccgtcgacgccgaacgcgcctccggctaccgctacggccagaaggcctacctg
gtgcagctgcgccgcaacggctccggcaccggcctggtcgaccccgtcccgctccccgac
ctgtcggtcatccagcaggccatcgccgacaccgagtgggtcctgcacgccgccaaccag
gacctgccgtgcctggccgagatcggcctggtgcccgcgcgcatcttcgacaccgagctc
gccgcccggctggccggactgccccgcgtgggcctcggcgccgtcgtcgagtcgctgctc
gggtactcgctgcagaaggggcactcggctgccgactggagcacccggcccctgcccgag
gagtggctggtctacgccgctctggacgtcgaggtactggtcgacctgcgggacgcgctg
gccgcgatcctcggggagcagggcaagaccgagtgggcccggcaggagttcgaggcgatc
ctggccgccggtccgccggcgcccaagcaggacccgtggcggcggacctccggcgtccac
gggctgcgcagccgccgtcagctgggcatgctgcgagccatctgggaggcgcgcgacgac
ctcgcccggcgccgcgacatcgcccccggtcgggtgctgcccgactcggcgatggtcgcg
gccgtgcaggccgacccgaagaacgagggcgccctgctggagctgccggtcttccgtggc
cgggccaaccggcgcatggtggcgcactggttcaccgcgctcgcgcgtggcaaggcacag
cccgacgacgagctgccgctgcacagcaagcccggcgacggtccgccgccggtgaaccgc
tgggccgaccgcgatccggcggccgccgcccgcctgcaggtggcccgcgccgggctcgcc
gagctgtcggagaagcacgccgtgccggtcgagaacatcgtctcccccgacctggtgcgc
cggatcatgtggagcccaccccggccccgcgatgccgcggcggtcaccgacgcgttgcgc
gacggcggcgcccgggagtggcagatcgagctcaccctcgacgtcctgaccgacgcgatc
ggccgcgactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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