KEGG   Burkholderia seminalis: WJ12_30445
Entry
WJ12_30445        CDS       T04851                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
bsem  Burkholderia seminalis
Pathway
bsem00300  Lysine biosynthesis
bsem00470  D-Amino acid metabolism
bsem01100  Metabolic pathways
bsem01110  Biosynthesis of secondary metabolites
bsem01120  Microbial metabolism in diverse environments
bsem01230  Biosynthesis of amino acids
Module
bsem_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bsem00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    WJ12_30445
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    WJ12_30445
Enzymes [BR:bsem01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     WJ12_30445
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AOJ29126
Position
2:2210506..2211744
AA seq 412 aa
MSLDSRQLATLAQQYGTPLWVYDADLIRDRIAQLRQFDVIRYAQKANSNVHILKLMREEG
ACVDAVSLGEIERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLAR
IGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIH
MHIGSGVDYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWD
AARKRIERHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPS
MYGSYHAVSVHAHDGTLPAGRPAVDLAIAGPLCESGDVFTQDTGGVVTHRKLPQPQIGDL
LFLHDAGAYGASMSSNYNSRPLAPEVLVDHGTPRLIRRRQTIEELLALETFE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgtcactcgattcccgccagctcgcgacgctcgcgcagcaatacggcaccccgctgtgg
gtgtacgacgccgacctcatccgcgaccgcattgcccaactgcgccagttcgacgtgatc
cgctacgcgcagaaggcgaactcgaacgtccatatcttgaagctgatgcgcgaggaaggc
gcgtgcgtcgacgccgtgtcgctcggcgagatcgaacgcagcctcgcggcgggcttcagc
ccggccggcgaaccggaaggcgtcgtgttcacggccgacctgatcgaccgcccgacgctc
gcggccgtgctcaagcacggcgtaaccgtcaacgccggctcgctcgacatgctcgcgcgc
atcggcgagcacgcgccgggccaccgcgtgtggctgcgcgtcaatcccggcttcggccac
ggccacagcaacaagaccaacaccggcggcccgcagagcaagcacggcatctggatcgac
gacgtgccgcgcgcgatcgagatcgtgcgccagtacgggctgaagctcgtcggcatccac
atgcacatcggctcgggtgtcgactacggccacctgtcgcaggtgtgcgatgcgatggtc
gatctcgtcacgtcgctcggccacgacatcgacgcgatctcggccggcggcggcctgtcg
atcccgtatcgcgacggcgaaccgcgcgtcgacgtcggtcactacttcagccagtgggac
gccgcccgcaagcggatcgagcggcacctcggccacccggtgcgcatcgagatcgaaccg
ggccgcttcctcgtcgcggaagccggcacgctcgtcaccgaagtgcaggccgtgaaccgc
cggccgaagcacgatttcgtgctgatcgacgcgggcttcaacgacctgatgcggccgtcg
atgtacggcagctatcacgcggtgtccgtgcacgcgcacgacggcacgctgccggccggc
cgcccggccgtcgatctggcgatcgcgggcccgctgtgcgaatccggcgacgtgttcacg
caggacacgggcggcgtggtcacgcaccgcaagctgccgcagccgcagatcggcgacctg
ctgttcctgcacgatgcgggcgcatacggcgcgtcgatgtcctcgaactacaacagccgg
ccgctcgcgccggaagtgctcgtcgatcacggcacgccgcggctgatccggcgccggcaa
acgatcgaggaactgctcgcactcgagacgttcgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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