KEGG   Bacillus subtilis subsp. subtilis 168: BSU17010
Entry
BSU17010          CDS       T00010                                 
Symbol
ymcB
Name
(RefSeq) (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bsu03016]
    BSU17010 (ymcB)
Enzymes [BR:bsu01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     BSU17010 (ymcB)
Transfer RNA biogenesis [BR:bsu03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    BSU17010 (ymcB)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM TRAM_2
Other DBs
NCBI-GeneID: 939451
NCBI-ProteinID: NP_389583
Pasteur: BG13418
UniProt: O31778
Position
1772843..1774372
AA seq 509 aa
MNEKQKLESGQVHPSDKKSEKDYSKYFEAVYIPPSLKDAKKRGKEAVTYHNDFKISEQFK
GLGDGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLNTCAIRENAENK
VFGELGHLKALKKNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHNIHRLPELLS
EAYLSKEMVVEVWSKEGDVIENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSR
RPEDIIQEVRRLASEGYKEITLLGQNVNAYGKDFEDMTYGLGDLMDELRKIDIPRIRFTT
SHPRDFDDRLIEVLAKGGNLLDHIHLPVQSGSSEVLKLMARKYDRERYMELVRKIKEAMP
NASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVK
KERLQRLNALVNEISAKKMKEYEGKVVEVLVEGESKNNPDILAGYTEKSKLVNFKGPKEA
IGKIVRVKIQQAKTWSLDGEMVGEAIEVK
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgaatgaaaaacaaaaattagagagcggacaagttcatccatcggacaaaaaatccgag
aaggattacagcaagtactttgaagctgtttacattccgccttctttaaaagacgcgaaa
aaacgaggcaaggaagccgttacttatcataatgactttaaaatttctgaacaatttaaa
ggattgggagacggaagaaagttctatatccgtacgtacggctgccaaatgaatgaacac
gatacagaggttatggcagggatctttatggcgctcggttacgaagcgacaaactctgtt
gacgatgccaatgtcattttgttaaatacatgtgcaatccgtgaaaatgctgaaaacaag
gtgtttggtgagctcgggcacttaaaagcactgaaaaaaaacaatcccgatctgatttta
ggcgtgtgcggctgtatgtcccaagaggaatcagtcgtgaaccgtattttgaaaaaacat
ccgtttgtcgatatgattttcggaacgcataacattcatcgcctgccggagcttttgtca
gaagcatacctttcaaaagaaatggttgtagaagtttggtctaaggaaggggacgttatt
gaaaaccttccaaaagtccgaaatggaaaaattaagggctgggtcaatatcatgtacggc
tgtgacaaattctgtacgtattgcattgtgccttacacacgcggaaaagaaagaagccgc
cgccctgaggatatcattcaggaagtgagaaggctcgcaagtgaaggctataaggaaatt
actctgttaggccaaaacgtaaacgcgtatggaaaagactttgaagatatgacgtacgga
cttggtgatttgatggatgaactgagaaaaatcgatatcccgagaatccgttttacaacg
agtcatccgcgcgactttgacgaccgcctcattgaagtgctggcaaaaggcggaaatctg
cttgatcacattcatcttccggttcaatcaggaagctcagaagttctcaagctgatggcc
cgcaaatatgacagagagcgttacatggagctggtgcgaaaaattaaagaagcaatgcca
aacgcttctttgacaacggacattatcgtcggatttccaaatgaaacggacgaacagttt
gaagaaacgctttctctataccgtgaagtggagtttgacagcgcctatacgttcatttac
tctccgcgtgaaggcactccggctgctaagatgaaagataatgtaccgatgcgtgtgaaa
aaagaacgcctgcagcgtctaaacgcactggtgaatgaaatttctgctaaaaaaatgaag
gaatacgaaggcaaggttgtcgaagtattagttgagggtgaaagcaaaaataaccctgat
attcttgctggctatactgaaaaaagcaagcttgtcaatttcaaagggccgaaggaagcc
atcggcaaaatcgtccgcgtgaaaatccagcaagcgaaaacatggtcgcttgacggagaa
atggtaggagaagcaatcgaggtgaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (36)   

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