KEGG   Bacillus subtilis subsp. subtilis 168: BSU33610
Entry
BSU33610          CDS       T00010                                 
Symbol
rnr
Name
(RefSeq) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSU33610 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsu03019]
    BSU33610 (rnr)
   03016 Transfer RNA biogenesis [BR:bsu03016]
    BSU33610 (rnr)
Enzymes [BR:bsu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BSU33610 (rnr)
Messenger RNA biogenesis [BR:bsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BSU33610 (rnr)
Transfer RNA biogenesis [BR:bsu03016]
 Prokaryotic type
  tRNA degradation factors
   BSU33610 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 TFIIE_beta CSN8_PSD8_EIF3K MarR_2 OB_Dis3 CsrA
Other DBs
NCBI-GeneID: 938644
NCBI-ProteinID: NP_391241
Pasteur: BG14065
UniProt: O32231 A0A6M3ZKU9
Position
complement(3451863..3454202)
AA seq 779 aa
MEKEAFMEKLLSFMKEEAYKPLTVQELEEMLNITEAEEFKELVKALVALEEKGLIVRTRS
DRYGIPEKMNLIKGKISAHAKGFAFLLPEDTSLSDVFIPPNELNTAMNGDIVMVRLNSQS
SGSRQEGTVIRILERAIQRVVGTYTETRNFGFVIPDDKKITSDIFIPKNGKNGAAEGHKV
VVKLTSYPEGRMNAEGEVETILGHKNDPGIDILSVIHKHGLPGEFPADAMEQASSTPDTI
DEKDLKDRRDLRDQVIVTIDGADAKDLDDAVTVTKLDDGSYKLGVHIADVSHYVTENSPI
DKEALERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINSQGQVTEHEIFQ
SVIKTTERMTYSDVNKILVDDDEELKQKYEPLVPMFKDMERLAQILRDKRMDRGAVDFDF
KEAKVLVDDEGAVKDVVIRERSVAEKLIEEFMLVANETVAEHFHWMNVPFIYRIHEEPNA
EKLQKFLEFVTTFGYVVKGTAGNIHPRALQSILDAVRDRPEETVISTVMLRSMKQAKYDP
QSLGHFGLSTEFYTHFTSPIRRYPDLIVHRLIRTYLINGKVDEATQEKWAERLPDIAEHT
SSMERRAVDAERETDDLKKAEYMLDKIGEEFDGMISSVTNFGMFVELPNTIEGLVHVSFM
TDDYYRFDEQHFAMIGERTGNVFRIGDEITVKVVDVNKDERNIDFEIVGMKGTPRRPREL
DSSRSRKRGKPARKRVQSTNTPVSPAPSEEKGEWFTKPKKKKKKRGFQNAPKQKRKKKK
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggaaaaagaagcatttatggaaaagcttctctcgtttatgaaggaagaggcgtacaaa
cctctgaccgttcaggaacttgaggagatgttaaatattacggaagccgaggagtttaaa
gagctcgtcaaagcgttagtcgccttggaagaaaaagggcttatcgtacggacgagaagc
gaccgctacggcattccggagaagatgaatttaataaaaggaaagatttcagcccatgcg
aaaggattcgcctttttgctgcctgaggatacgtcgttaagtgatgtgtttattccgcct
aatgagctaaatacggcaatgaacggcgatatcgtcatggtgcgtctgaactcacaatca
agcggctccaggcaggaaggaaccgtcatacggattttagaaagagcgattcagcgggtt
gtcggcacgtatacagaaacgagaaacttcggctttgtcattccggacgacaaaaaaatc
acgagtgacatcttcattccgaaaaatgggaaaaatggagctgcggaagggcataaggtt
gttgtcaagctgacgagctatcctgaaggccgcatgaacgcagagggtgaggttgaaacc
attctcggccacaaaaacgacccgggcattgatattttatcggtcattcataagcacggc
ctgccgggagaatttccagctgacgcgatggaacaggcatcaagtacgcctgacacgatt
gatgaaaaagatctgaaagaccgccgtgatctccgtgaccaggtgattgtcaccattgat
ggtgcggatgcgaaggatttggatgatgcagttaccgtgacgaagcttgatgatggaagc
tacaagcttggcgttcacatagctgatgtcagccattacgtaaccgaaaactcgccgatt
gacaaagaagcgcttgaaagagggacaagtgtgtatctggttgaccgtgtcatcccgatg
attccgcacagattgtcaaacggcatctgctccttaaatccaaaggttgaccgcctgacg
ctttcttgtgaaatgacaattaacagtcagggacaggtgacagagcacgagatcttccaa
agtgtcatcaaaacaacggaaagaatgacatattcagatgtgaataaaattcttgttgat
gatgatgaagagctgaaacaaaaatacgagcctcttgttccgatgttcaaagacatggag
cgtctggctcaaattctgcgcgataagcggatggaccgcggcgccgttgactttgatttc
aaagaagcaaaggtgcttgttgatgacgaaggagcggttaaagacgttgtgatcagagaa
cgctctgtcgccgagaagctgattgaagaatttatgcttgtagcaaacgaaacagttgcg
gagcatttccattggatgaatgtcccgtttatataccggattcacgaagagccgaatgct
gaaaagctgcaaaagtttttagaatttgtgacgacatttggctatgtggtgaaaggaacg
gcggggaatattcatccgcgcgcgctgcaaagcattctggacgctgtgcgtgacagacca
gaggaaacggttatatctactgttatgctccgttcgatgaaacaggcgaaatacgacccg
caaagcttggggcacttcggtctgtcaacggaattctatacgcatttcacatcaccgatc
cgccgttacccggacttaatcgttcaccgtctgatccgaacgtatttgatcaacggcaag
gtcgatgaagcgacacaggaaaagtgggctgaacgcctgccggatatcgccgaacataca
tcatctatggagcgccgtgcagttgacgccgagcgtgagacggatgatctgaaaaaagcg
gaatacatgcttgataaaatcggtgaagagtttgacggcatgatcagctctgtgacaaac
ttcggaatgttcgtcgagctgccgaatacaattgaaggactcgtccatgtcagctttatg
acagatgactactaccgctttgacgaacagcatttcgcaatgattggcgagcggacaggc
aacgtcttccgcatcggggatgaaatcacagtcaaggttgtcgatgtcaataaagatgag
cgcaatatcgactttgaaattgtcggcatgaaaggcactccgcggcgtccgagagaattg
gacagcagccggagcagaaaacgcggaaagcctgccagaaaacgtgttcaaagcaccaat
acacctgtttctccagctccgtctgaggaaaaaggggagtggttcactaagccgaagaag
aaaaagaaaaaacgcggcttccagaatgctccgaaacagaaacggaaaaagaagaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (48)   

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