KEGG T00010: BSU38700

Bacillus subtilis subsp. subtilis 168: BSU38700

Entry

BSU38700          CDS       T00010

Symbol

sigY

Name

(RefSeq) RNA polymerase sigma factor SigY

K03088

RNA polymerase sigma-70 factor, ECF subfamily

Organism

bsu Bacillus subtilis subsp. subtilis 168

Brite

KEGG Orthology (KO) [BR:bsu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsu03021]
    BSU38700 (sigY)
Transcription machinery [BR:bsu03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BSU38700 (sigY)

SSDB

Motif

Pfam:

Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_16 Terminase_5 GerE

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Pasteur:

UniProt:

Position

complement(3970312..3970848)

AA seq 178 aa
MDTQEEQRLIQQAKEGNDEAFTALFHYHYSFLYKYLLKLSLHPDLSEELVQETFLKGYIH
LRSFQGRSKFSTWLISIASRLYLDHQKKRKREWKRNQTVTEETIRKIKWDVSAKGAEWSE
TLDLFSKLDPKLRTPVLLRHYYGYTYAEIGVMLQIKEGTVKSRVHKGLQQIRKEWDDE

NT seq 537 nt +upstreamnt +downstreamnt
ttggatacacaagaagaacagcggctgatccagcaggcgaaagagggaaacgacgaggcg
tttacagcccttttccactatcactattctttcttatataaatacttgttaaagctttcc
cttcaccccgatctcagcgaggaacttgttcaggaaacctttctgaaagggtacatccat
ttaagaagctttcagggccgttcaaaattctccacatggctgatctccattgcatcgcgg
ctctatctcgatcaccagaaaaagagaaagagagaatggaaacggaatcagacagttacg
gaggaaacaatccgcaagatcaagtgggacgtgtcggcgaaaggggcagagtggagcgaa
acgctcgatctgttttcaaagctggaccctaaactgcgcacaccggttttattaaggcat
tactacggctatacctacgctgaaatcggggtgatgcttcaaatcaaagaaggcactgta
aagtccagagttcataaagggctccagcaaatcagaaaggagtgggatgatgaataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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