KEGG   Bos taurus (cow): 100137723
Entry
100137723         CDS       T01008                                 
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
bta  Bos taurus (cow)
Pathway
bta03022  Basal transcription factors
bta03420  Nucleotide excision repair
bta05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100137723 (GTF2H4)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100137723 (GTF2H4)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100137723 (GTF2H4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bta03021]
    100137723 (GTF2H4)
   03400 DNA repair and recombination proteins [BR:bta03400]
    100137723 (GTF2H4)
Transcription machinery [BR:bta03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100137723 (GTF2H4)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     100137723 (GTF2H4)
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 100137723
NCBI-ProteinID: NP_001094527
BGD-bta: BT17417
Ensembl: ENSBTAG00000046757
VGNC: 29697
UniProt: A6H7G8
Position
23:complement(28159272..28165863)
AA seq 463 aa
MESTPSRGGLNRVHLQCRNLQEFLGGLSPGILDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVLSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSAEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TAHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLMFENSAKRLMVVTPAGHSDVKRFWKRQKHNS
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggagagcaccccttccaggggtggactgaatcgagtacacctacaatgcaggaacttg
caggaattcctaggaggcctgagccctggtatattggatcgattgtatgggcaccctgcc
acctgcctggctgtcttcagggagctcccatctttggctaagaactgggtgatgcggatg
ctctttctggagcagcctttgccgcaagctgctgtagccctgtgggtgaagaaggaattc
agcaaagctcaggaggaaagcacggggttgctgagcggcctccgtatctggcacacccag
ctactccctggtggtctccagggcctcatcctcaaccccatcttccgccaaaacctccgc
attgcccttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcatgcccgggacgtcctctcacttgacaagtatgccgaggagcgatgggaggtggtc
ctgcacttcatggtgggatcccccagtgcagccgtcagccaggacttggctcagctcctc
agccaggctgggctcatgaagagtgccgaacctggagagccaccctgcattacctctgcc
ggcttccagttcctgttgctggacaccccagcccagctctggtactttatgttgcagtat
ctgcagacagcccagagtcggggcatggacctagtggagattctctccttcctcttccag
ctcagcttctccactctgggcaaggattactctgtggaaggtatgagtgattctctgttg
aacttcctgcaacatctgcgtgagtttgggcttgttttccagaggaagaggaaatctcgg
cgttactaccccacacgcctggccatcaatctctcgtcaggtgtttctggggctgggggc
actgcacatcagccaggcttcattgttgtggaaaccaattaccgactgtatgcctacacg
gagtcggagctgcagatcgccctcattgcccttttctctgagatgctctatcgcttcccc
aacatggtggtggcacaggtgacccgggagagcgtgcagcaggccattgccagtggcatc
acagcccagcagatcatccatttcctaaggacaagggcccacccagtgatgcttaaacag
acaccggtgctgcctcccaccatcacagaccagattcggctctgggagctggaaagggac
aggctccggttcaccgaaggcgtcctgtataaccagttcctgtcacaagtggactttgag
ctgctgctggcccacgcgcgggagctgggcgtcctgatgttcgagaactcggccaagcgg
ctcatggtggtgaccccggctgggcacagcgacgtcaagcgcttctggaagcggcagaaa
cacaactcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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