KEGG   Bos taurus (cow): 100139697
Entry
100139697         CDS       T01008                                 
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
  KO
K19672  intraflagellar transport protein 140
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:bta03037]
    100139697 (IFT140)
Cilium and associated proteins [BR:bta03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   100139697 (IFT140)
SSDB
Motif
Pfam: ANAPC4_WD40 WD40 Coatomer_WDAD tRNA_int_end_N2 TPR_12 Cytidylate_kin2
Other DBs
NCBI-GeneID: 100139697
NCBI-ProteinID: XP_002697959
BGD-bta: BT17951
Ensembl: ENSBTAG00000007245
VGNC: 30065
UniProt: E1B860
Position
25:complement(1184359..1242591)
AA seq 1457 aa
MALYFDHRIEAPDTVGSPSHIGWHPIYPFLAVASVSTTSGGSVDVYLEQGERVPDMHVER
SFRVTCLCWHPTRLILAIGWESGEVVMFNKQDKEQHAVPATHTADIAILAWSPNGNCLVS
GDRLGVLLLWRLDQRGRVQGMPLLRHEYGQPLTHCIFLLPPPGEDLVQLARAAVSGDEKA
LDMFNWKKSGFRSILKMGSQEGLSFFVSLTDGTVHHVDEKGRTAQVASTDSSIQTLFYLE
QRGALVAVTDSLLLCLFTVTPEGTAEEVMKVKLSGKTGHRADIALIDGSLLVTAIGEAAL
RFWDLERGENYVLSPEEKFGFEKGENINCVSYCKVKGLLAAGTDKGRVAMWRKAPGLPNG
RGAEGKDKWTLQAPTELEGNIMQIKWGSRKSLLAVNSISSVLILHEQAMSSHFHQQVAAV
QVSPSLLSVSFLSTGVTHSLRTDMHVSGVFATKDAVAVWNGKQVVIFEPSGATLRSAGSF
LCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLPFSESEGNPCFLDICGTFLVVGTDL
AHFKSFDLSRREAKVHCGCKSLAELVPGVGGLTSLRCSASGSKISLLLSKADNSPDSKIC
FYDVDMDTVTILDLKTGQIDQRETLSINGQETKKSQALEDERLTDLVPVSHFWDQSEPRL
FVCEAVREVPGAPPQPADRNALAEADVVVLSFFVSEEHGFLLQDSFPRPPAFQTLLGIQV
PHYYFTRKPGEANLEDQLDSGSQCIPQAVGRRPLRDFVGLEDCDKPTRDAMINFSFFLTI
GDMDEAFRSIKLIKSQAVWENMARMCVKTQRLDVARVCLGHMGHARGARALREAQREPEP
EARVAMLAVQLGMLEDAEQLYRRCGRYDLLNRLLQASGQWQRAIEVAERHDRMHLRTTYY
NYARHLEASGDCSPALSYYEKSDTHRFEVPRMLVEDLQALGLYVNKMKDKTLWRWWAQYL
ESQAKMDAALHYYELAQDYFSLVRIHCFQGNIQRAAEIASETGNWAASYHLARQYESQNE
VRQAVHFYTRAQAFNNAIRLCKEHGLDDQLMNLALLSSPEDMLEAARYYEERGEQMDRAV
MLYHKAGHFSKALELAFATQQFAALQLVAEDLDEKSDPVLLARCSDFFLEHGQCEKAVEL
LLAAKKYQEALQLCLEQNLTITEEMAEKMTVPKDCKELSEEARRVLLEQIASCCMRQGSY
HLATKKYTQAGDRLKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAANYLQSLDWRKDPEV
MKSIISFYTKGRALDLLAGFYDACAQVEVDEYQNYDKAHGALTEAYKCLSKAKARSPLDQ
EARLAQLQSRMTLVKRFMQARRTYTEDPKGSVRQCQLLLEEPHLDSGVRVGDVYGFLVER
HVHSGDLQTAYRYLEEMRQRLPSANVSYYVSQHTVDAVHQGLGLPLTCAAPKRAQHSSME
EHKEADEEVAEEVESGP
NT seq 4374 nt   +upstreamnt  +downstreamnt
atggccctctactttgaccaccgcatagaagccccagacacagtcgggtctccgtcccac
attggctggcatcccatctacccattcttggcggttgcttctgttagcacaacctcagga
ggcagcgtggatgtgtatctggagcaaggcgagcgcgtgccagacatgcatgttgagagg
tcgttccgggtcacctgcctgtgctggcacccaacgcggctgatcctggctattggctgg
gagtctggagaagtggtcatgtttaacaagcaggacaaggagcagcatgcagtccccgcc
acgcacacagccgacattgccatcctcgcctggagccccaacgggaactgcctagtgtcg
ggggacaggcttggcgtcctgctcctctggaggctggaccagcggggccgcgtgcagggg
atgccgctactgcggcacgagtacgggcagcccctcacccactgcatcttcctgctgccc
ccgcctggcgaggacctggttcagctggccagggcggcagtgagcggggacgagaaggcc
ctggacatgtttaactggaagaagagcggcttcaggagcatcctgaagatggggtctcag
gagggcctctcgttctttgtcagcctgacagacgggaccgtgcaccacgtggacgagaaa
ggcaggacggcccaggtggcatccacagacagctccatccagacactgttctacctggag
cagaggggggcgctggtggcggtgacggacagcctgctgctctgcctgttcacagtgacg
cccgagggcacggccgaggaggtgatgaaggtgaagctgagcgggaagacgggccaccgg
gcagacatcgcgctgatcgacggcagcctgctcgtgaccgccatcggagaggcggcgctc
agattctgggatttagaacgaggggagaactacgtcctgagtccagaggagaagtttggt
tttgaaaaaggagagaatataaattgcgtttcttactgtaaagttaaaggtctcctggca
gcaggtaccgacaaggggcgagtagccatgtggagaaaagcgccgggcctcccgaacggc
cgcggggcggagggcaaagacaagtggacccttcaggcccccactgagctggaaggaaac
atcatgcagataaagtggggctccaggaagagcctcctggccgtgaacagcatcagctcc
gtgctcatcctccatgaacaggccatgtcatcccacttccaccagcaggtggccgccgtg
caggtctccccaagcctcctcagcgtgtccttcctgtccacgggggtgacccacagcctg
cgcacagacatgcacgtcagcggagtgtttgccaccaaggatgctgttgccgtctggaat
ggaaaacaggtggtgatctttgagccgtctggagccacgttacgcagtgcagggtccttc
ctgtgtgagtctccagtgttagccatgcatgaagaaaacgtttatacggtggagccaaac
agagtccaagttcgaacctggcaggggaccgtgaagcagctcctgccgttctccgagtca
gaggggaacccatgcttcttggacatctgtggaactttcctggttgtagggacggacttg
gctcactttaaaagctttgatctttcccgaagagaggccaaggtgcactgcggctgcaag
agcctggccgagctggtcccaggcgtggggggcctgacctcactcagatgcagtgccagc
ggcagcaagatcagtctcctcctcagcaaggctgacaatagccccgattcaaaaatctgc
ttctacgacgtggatatggacacagtgaccatcctcgacctcaagacaggacagatagat
cagagagagacattgtccattaatgggcaggagacaaagaagagccaggccctggaggat
gagaggctgacagacctcgtgcccgtcagccacttctgggatcagagcgagccccggctg
ttcgtgtgcgaagccgtgcgcgaggtgcccggcgccccaccacagcccgcggacaggaac
gcgctggccgaggcagacgtggtggtcctgtccttcttcgtctcagaagagcacggcttc
ctgttgcaggacagcttcccccgtccccctgccttccagacgctcctggggatccaggtg
ccccactactacttcacgagaaagccaggagaagctaatctggaggaccagctggactcc
gggtcccagtgcatcccccaggcagtgggcaggaggcccctgcgggacttcgtagggctg
gaggactgcgacaagcccacgcgggacgccatgatcaacttcagctttttcctgaccatc
ggggacatggatgaggccttcaggtccatcaagctcatcaaaagccaggccgtctgggag
aacatggcacgcatgtgcgtgaagactcagcggctggacgtggccagggtgtgcctgggg
cacatgggccacgcccggggggcccgagcgctgcgcgaggcccagcgggagccggagccg
gaggccagggtggccatgctggccgtgcagttgggcatgctggaggacgcagagcagctc
tacaggaggtgtgggcgctacgacctcctcaaccgcctgctgcaggcctcaggccagtgg
cagagggccatcgaggtggccgagcgccacgaccgcatgcacctgcgcaccacctactac
aactacgcccggcacctggaggccagcggggactgcagcccggccctcagctactacgag
aagtcggacacgcaccgcttcgaggtgccgcggatgctggtggaggacctgcaggctctg
gggctgtacgtcaacaagatgaaggacaagacgctgtggcggtggtgggcccagtacctg
gagagccaggccaagatggacgcggcgctgcactactacgagctggcccaggactacttc
tccctggtccgcatccactgcttccagggcaacatccagcgggccgccgagatagccagc
gagactgggaactgggcggcctcctaccacctggcccggcagtacgagagccagaacgag
gtgcggcaggccgtgcacttctacacgcgtgcccaggccttcaacaacgccatccgcctg
tgcaaggagcacggcctggacgaccagctcatgaacctggccctgctgagctcccccgag
gacatgctggaggccgcgcgctactacgaggagaggggcgagcagatggaccgggccgtc
atgctgtaccacaaggccggccacttctccaaggccctggagctggcctttgccacccag
cagtttgcagccctgcagctggtggcagaggacctggatgaaaagtcggatcccgtcctc
ctggcccgttgctctgacttcttcctggagcacggtcagtgcgagaaggccgtggagctg
ctgctggccgccaagaagtatcaggaagcactgcagctgtgcctggagcagaacctgacc
atcaccgaggagatggctgagaagatgacggtgcccaaggactgcaaggagctgtccgag
gaggcccggcgggtgctgctggagcagatcgccagctgctgcatgcgccagggcagctac
cacctggccaccaagaagtacacgcaggcaggggacaggctgaaggccatgagggcgctg
ctcaagtctggggacacggagaagatcgtgttcttcgcgggcgtctcgcggcagaaggag
atctatgtcatggcggctaactacctgcagtccctggactggcggaaggaccccgaggtc
atgaagagcatcatcagcttctacaccaagggccgtgcgctggaccttctggccggcttc
tacgatgcctgcgcccaggtggaggtcgacgagtaccagaactacgacaaggcacatggg
gcgctgaccgaggcctacaagtgcctgtccaaggccaaggccaggagcccactggaccag
gaggccaggctggcgcagctgcagagcaggatgacgctggtgaagcgcttcatgcaggcg
cgcaggacctacacggaggaccccaaggggtcggtccggcagtgccagctgctcctggaa
gagccgcacctggacagcggcgtccgtgtcggggacgtctacggcttcctggtggagcgc
cacgtgcactcgggagacctgcagacggcctacaggtacctggaggagatgcggcagcgg
ctgccctccgccaacgtgtcctactacgtgagccagcacaccgtggacgccgtgcaccag
ggcctggggctccctctgacctgcgcagcgccgaagcgcgcgcagcacagcagcatggag
gagcacaaggaggcggacgaggaggtggccgaggaggtggaaagtgggccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (6)   
   Pfam (6)   
All databases (58)   

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