KEGG   Bos taurus (cow): 407103
Entry
407103            CDS       T01008                                 
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
  KO
K04968  transient receptor potential cation channel subfamily C member 5
Organism
bta  Bos taurus (cow)
Pathway
bta04360  Axon guidance
bta04929  GnRH secretion
Brite
KEGG Orthology (KO) [BR:bta00001]
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    407103 (TRPC5)
  09158 Development and regeneration
   04360 Axon guidance
    407103 (TRPC5)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bta01009]
    407103 (TRPC5)
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:bta04040]
    407103 (TRPC5)
Protein phosphatases and associated proteins [BR:bta01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     407103 (TRPC5)
Ion channels [BR:bta04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   407103 (TRPC5)
SSDB
Motif
Pfam: Ion_trans TRP_2 Ank_2 Ank Ank_3 Ank_4 PKD_channel
Other DBs
NCBI-GeneID: 407103
NCBI-ProteinID: NP_001160046
BGD-bta: BT12543
Ensembl: ENSBTAG00000010065
VGNC: 36385
UniProt: F1MTE6
Position
X:complement(59966892..60322797)
AA seq 974 aa
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHQRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNVGCKKKACHGPPLIRTMPRVGGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQPHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEARGTAQSTECPLACSSSLHCVSSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggcccaactgtactacaaaaaggtcaactactcaccatacagagaccgcattcccctg
cagattgtgagggcagagacagagctctctgctgaggagaaggccttcctcaatgctgtg
gagaagggggactatgccactgtgaagcaggccctccaggaggccgagatctactacaat
gtcaacatcaactgcatggacccactgggccggagcgccctgctaattgccattgagaat
gagaacttggagatcatggagctcctgctgaaccacagtgtgtatgttggcgatgcactg
ctctatgccatccgcaaggaagtggtgggtgctgtggagcttctgctcagctacaggcgg
cccagtggagagaagcaggtccccactcttatgatggacactcagttctctgagttcaca
ccggacattactcccatcatgctggctgcccacaccaacaactacgagatcatcaaactg
ctcgtccaaaaacgggtcactattccccggccccaccagatccgctgcaactgtgtggag
tgtgtgtccagttcagaggtagacagcctgcgccactcccgctcccgactgaacatctat
aaagccctggcaagtccctcactcatcgccttatcaagtgaggatcccatcctaactgcc
ttccgcctgggctgggagctcaaggagcttagcaaggtggagaatgagttcaaggctgag
tacgaggagctctcccagcagtgcaagctctttgccaaagacctgctggaccaggctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcaaaagtaccatgatctagccaagctgaaggtggccatcaaatatcaccagaaagag
tttgtggcccagcccaattgccaacagttgcttgccactctgtggtacgacggcttccct
ggatggcggcggaaacactgggtcgtcaagcttctgacgtgcatgaccattgggttcctg
tttcccatgctgtctattgcttatctcatctcacccaggagcaaccttgggctgttcatc
aagaaacccttcatcaagtttatctgccacacagcgtcatatctgaccttcctcttcatg
cttctcctggcttctcagcacatcgtcaggacagacctccatgtacaaggacctcccccg
actgttgtggagtggatgatactgccttgggttctcggtttcatttggggggagataaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaactcactctacctggcaactatttccttgaagattgtagcctatgtcaagtat
aatggttcccgtccaagggaagaatgggaaatgtggcacccgactctgattgcagaagct
ctctttgcgatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttagggcctctgcagatctctttggggcgcatgttgctcgatatcctcaaattc
ctctttatctactgcctggtactgctggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcaatcgatgagcccaacaactgcaaggggatcagatgcgagaaa
cagaacaatgccttctccacgctctttgaaacccttcagtccctcttctggtctgtattc
ggccttttaaatctctatgtcaccaatgtgaaagccagacatgagttcacagagtttgtg
ggagcgaccatgtttgggacatacaatgtcatctccctggtagtgctgctgaacatgctg
atcgccatgatgaacaactcctaccaacttattgctgatcatgctgatattgagtggaag
tttgcaaggacgaagctctggatgagttactttgatgaaggtggcaccttgccacctcct
ttcaacattatccccagccccaagtcatttctataccttggcaactggttcaacaacacc
ttctgccctaaaagagaccctgatggtagacgaagaaggcacaacttgagaagcttcaca
gaacgccatgctgacagcctgatacagaaccaacattaccaggaagttatcaggaattta
gtcaaaagatatgtggcagctatgataagaaattccaaaacaaatgagggactaacagaa
gaaaattttaaggaattaaagcaggatatctccagctttcgatatgaagtgcttgacctc
ttgggaaacaggaagcaccaaaggagaagcttttccactagcagcactgaactctctcag
agggatgataccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttc
aatgtaggctgcaagaaaaaagcctgccatgggccacctctcatcaggactatgccaaga
gtcggtggtgcccaaggcaagtcaaaagctgagtcatcaagcaaacgatccttcatgggt
ccctctctcaagaaactgggtctcctattctccaagtttaatggtcatatgtccgaaccc
agttcagagccgatgtacacaatctctgatggaattgttcagccacactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagcccggggcactgctcagagcactgaatgccct
ctagcctgttccagctctcttcactgtgtatccagcatctgttcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacgtggggagaggcttgtgacctgctcatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (38)   

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