KEGG   Bos taurus (cow): 407151
Entry
407151            CDS       T01008                                 
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
  KO
K04969  transient receptor potential cation channel subfamily C member 6
Organism
bta  Bos taurus (cow)
Pathway
bta04022  cGMP-PKG signaling pathway
bta04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04022 cGMP-PKG signaling pathway
    407151 (TRPC6)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    407151 (TRPC6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:bta04040]
    407151 (TRPC6)
Ion channels [BR:bta04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   407151 (TRPC6)
SSDB
Motif
Pfam: TRP_2 Ion_trans PKD_channel Ank_2 Ank Ank_4 Ank_5 ING XkdW
Other DBs
NCBI-GeneID: 407151
NCBI-ProteinID: NP_001160044
BGD-bta: BT28249
Ensembl: ENSBTAG00000011227
VGNC: 36386
UniProt: Q9MYW0
Position
15:7313317..7473504
AA seq 931 aa
MNQSPAAFGPRRGGSPAVVAGAGARRNESQDYLLMDSELGDDAQPPLPAYGYYPCLRGTD
SRLTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEEC
LSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAIL
SHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRK
GARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELS
NELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEIHHSGGDHYR
PNLSRLKLAIKYDVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFL
ALVYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKILPNETSTDHA
KQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAAS
FIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYA
IAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYI
GAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLL
NMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLRL
KKWISELFQGHKKGFQEDAEMNKRNEGKKFGILGSHEDLSKLSLDRKQFAHSKQSSIRSS
EDFQLNSFTNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLE
EKTQNSEDLAELIRKLGEKLSMEPNQEESNR
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgaaccagagcccggccgcgttcgggccccggaggggcggctctcccgccgtggtggcc
ggggctggcgcgcggcgcaacgagagccaagactacctgctcatggactcggagctggga
gacgacgcgcagcccccgctgcctgcctacggctactacccctgcctccggggcaccgac
agtagactgacccatcggcggcagacagttctccgtgagaaggggagacggttagctaac
cgaggaccagcgtacatgtttaacgaccactcaacaagcctatctattgaggaggaacgc
tttttagatgcagctgagtatggcaacatcccagtggtaaggaagatgttggaagaatgc
ctctcactcaatgtcaactgtgtggattacatgggccagaacgccctgcagctggcagtg
gctaatgagcatctggaaattacagaacttcttctcaagaaagaaaatctctctcgcgtt
ggggatgccttgcttttagctattagtaaaggttatgttcggattgtggaagccattctc
agtcacccagcttttgctgaaggcaagcggttagcaaccagccccagtcagtctgaactc
cagcaagatgatttttatgcatatgatgaagatgggacacggttctcccatgacgtgacc
ccaatcattctggctgcccactgccaagaatatgaaattgtgcacaccctcttgcggaag
ggtgctcggatcgaacggcctcatgactatttctgcaagtgcagtgaatgcaaccagaaa
cagaagcatgactccttcagccactccagatctagaattaacgcttacaaaggcctggcg
agcccagcttacctgtcattgtctagcgaagacccagtcatgacagctttagagcttagc
aatgagctggcagtgctggccaacatagagaaggagttcaagaatgactacaaaaaactg
tcgatgcagtgcaaagattttgttgttggactccttgatctgtgcagaaataccgaagaa
gtagaagccattctgaatggggatgttgaaatacaccacagtggtggagatcactatcgt
cctaacctcagccgtttaaaacttgccattaagtatgatgtaaaaaaatttgtagcccat
ccaaactgccaacagcagctcctgtccatatggtatgagaacctttccgggctgcggcag
cagaccatggcggtcaagttccttgtggtcctcgccgttgccgtgggactgcccttcctg
gctctcgtttactggttcgctccgtgcagcaagatgggaaagataatgcgtggaccattc
atgaagtttgtggcacacgctgcctccttcaccatttttctgggactgctagtcatgaat
gcagctgacagattcgaaggcaccaaaatccttcctaatgaaaccagcacagatcatgca
aaacagctgttcaggatgaaaacatcctgcttctcatggatggagatgctcattatttcc
tgggtaataggcatgatatgggctgaatgtaaagaaatttggactcaaggccccaaggag
tacttgtttgagttgtggaatatgcttgattttggaatgctggcaatctttgcagcatca
ttcattgcaagattcatggcattttggcatgcttccaaagcccagagcatcattgatgca
aatgatactttaaaagatttaacaaaagtcacactgggagacaatgtgaaatactacaat
ttggccaggataaagtgggacccctctgatcctcaaattatatctgaaggtctttatgca
attgctgtagttttaagtttctccagaatagcctacattttaccagcaaatgaaagcttt
ggacctctgcagatatcacttggaagaacggtaaaagatatcttcaagttcatggtcata
ttcatcatggtgtttgtggcctttatgattggaatgttcaacctctattcctactacatt
ggtgcaaagcaaaacgaagccttcacaacagtggaagagagttttaagacactgttttgg
gctatatttggactttctgaagtgaaatcagtggtcatcaactataatcacaaatttatt
gaaaacatcggttatgttctttatggagtctataatgttacaatggtcattgttttgcta
aacatgttaattgcaatgatcaacagttcattccaggaaattgaggatgatgctgatgtg
gaatggaaattcgcaagggccaaactttggttttcttactttgaggagggaagaactctt
cctgttcccttcaacctggtgccaagtccaaagtccctgttttatctcttattgaggctt
aaaaaatggatttctgaattgttccagggccataaaaaaggtttccaggaggatgcagaa
atgaacaagagaaatgaaggaaagaaatttggaattttgggaagtcatgaagacctttca
aaattatcacttgacagaaaacagtttgcacatagtaaacaatcaagtataaggagctca
gaagatttccagttaaacagtttcactaatcctccaagacaatatcagaaaataatgaag
aggctcattaaaagatatgtattacaagcccagatagacaaggagagtgatgaagtgaat
gaaggggaactgaaggaaattaaacaagacatctcaagtctccgctatgaactccttgaa
gaaaaaactcagaattcagaagacctggcagaacttattagaaaacttggggagaaatta
tcaatggagccaaatcaagaggaaagcaatagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (38)   

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