KEGG   Bos taurus (cow): 510029
Entry
510029            CDS       T01008                                 
Symbol
PSMC4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
  KO
K03063  26S proteasome regulatory subunit T3
Organism
bta  Bos taurus (cow)
Pathway
bta03050  Proteasome
bta05010  Alzheimer disease
bta05012  Parkinson disease
bta05014  Amyotrophic lateral sclerosis
bta05016  Huntington disease
bta05017  Spinocerebellar ataxia
bta05020  Prion disease
bta05022  Pathways of neurodegeneration - multiple diseases
bta05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    510029 (PSMC4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    510029 (PSMC4)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    510029 (PSMC4)
   05012 Parkinson disease
    510029 (PSMC4)
   05014 Amyotrophic lateral sclerosis
    510029 (PSMC4)
   05016 Huntington disease
    510029 (PSMC4)
   05017 Spinocerebellar ataxia
    510029 (PSMC4)
   05020 Prion disease
    510029 (PSMC4)
   05022 Pathways of neurodegeneration - multiple diseases
    510029 (PSMC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:bta03051]
    510029 (PSMC4)
Proteasome [BR:bta03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     510029 (PSMC4)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_5 AAA_2 AAA_16 RuvB_N AAA_22 nSTAND3 DUF815 AAA_28 RNA_helicase Mg_chelatase AAA_14 TIP49 AAA_18 NTPase_1 ATPase_2 NACHT AAA_3 IstB_IS21 AAA_7 TsaE AAA_33 Parvo_NS1 AAA_25 AAA_17 Zeta_toxin NB-ARC AAA_24 ABC_tran DUF3450 AAA_30 GrpE
Other DBs
NCBI-GeneID: 510029
NCBI-ProteinID: NP_001030255
Ensembl: ENSBTAG00000009414
VGNC: 33458
UniProt: Q3T030
Position
18:49489069..49499930
AA seq 418 aa
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggaggagataggtatcctggtggagaaagctcaggatgagatcccagccctgtctgtg
tcacggccccagactggcctgtccttcctggggcctgagccagaggacttggaggacctc
tacagccgctacaagaagctgcagcaagagctggagttcctggaggtgcaggaggagtat
atcaaggatgaacaaaagaacctgaagaaggaattcctccatgcccaggaggaggtgaaa
cgaatccagagcatcccattggttatcgggcagtttctggaggctgtggatcagaataca
gccatcgtgggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgac
cgggagctgctcaagcccaacgcctcggtggccctccacaagcacagcaatgccctggtg
gacgtgctgccccccgaggccgacagcagcatcatgatgctcacctcagatcagaagcca
gacgtgatgtatgcggacattgggggcatggacatccagaagcaggaggtgcgggaggct
gtggagctcccactcacacacttcgagctctacaagcagatcggcatcgacccaccccga
ggcgtcctcatgtacggcccacctggctgcgggaagaccatgctagcaaaggctgtggct
catcacacgacagctgcattcatccgcgtcgtgggctcagagttcgtacagaagtacctg
ggcgagggccctcgcatggtccgggacgtgttccgcctggccaaggagaacgcacctgcc
atcatcttcatagatgagattgatgccatcgccaccaagagatttgatgcccagacaggg
gctgacagggaggttcagagaatcctactggagctactgaatcaaatggatggattcgac
cagaatgtcaacgtcaaggtgatcatggccacaaacagagcagacaccctggatcctgcc
ctgctgcggccgggacgccttgaccgtaaaattgaatttccactccctgaccgccgccag
aagagactgattttctctactatcaccagcaagatgaatctctctgaggaggttgacttg
gaagattatgtggctagaccagataagatttcaggagctgatatcaactccatctgtcag
gagagcgggatgctggctgtccgagagaatcgctacattgttttggccaaggacttcgag
aaagcgtacaagacagtcatcaagaaagacgaacaggagcatgaattttacaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (34)   
   Pfam (34)   
All databases (102)   

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