KEGG   Bos taurus (cow): 510381
Entry
510381            CDS       T01008                                 
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bta03400]
    510381 (SMC6)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     510381 (SMC6)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 TPR_MLP1_2 AAA_29 HJURP_C FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 510381
NCBI-ProteinID: XP_002691521
BGD-bta: BT17197
Ensembl: ENSBTAG00000018256
VGNC: 35003
UniProt: E1BFH7
Position
11:80851884..80926950
AA seq 1098 aa
MAKRKEENFFSPENAKRPRQEELDDFDKDECDEDECAVSFTNGTSTLTAAEVGIIESIQL
KNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAITTNRGSSLKGFVKDG
QNSADISITIRNRGDDAYRGNVYGDTIIVQQHISMDGSRSYKLKSATGAVISTKKEELIG
ILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERT
KEQINQGEERLSELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAI
RDNIKIGEDRAARLERKTEEQQVRLNEAEKKYKDIQDKLEKISQETSARAPECMALKADL
TSKKRAYNEAEVLYNRSLNEYKALKKDDEQLCRRIEELKKSADQSLEPERLERQKKISWL
KERIKALQDQESSVNQEIEQFQQAIEKDKEEHTRIKREELDVKTTLNFNQRQLKELKDSK
TDRLKRFGPHVPALLEAIDDAYRRGHFTYKPVGPLGACIHLRDPELALAIESCLKGLLQA
YCCHNHADERVLQALMKKFYSPGTSRPQIIVSEFRNEMYDVRHRAAYHPEYPTVLTALEI
DNAVVANSLIDMRSIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFAGRYYSSE
YTRPKFLSRDVDSEISDLEDEVENKKAQILNLQQHLSTLQKDIKCNEELLRRYQLHYKEL
KMKIRKSISEIRELENIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQKENMEHLKSLK
VEAENKYDEIKQKINQLSELADPLKDELNLADSEVDNQKRGKRHYEDKQKEHLDTLNKKK
RELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASYGDREEIMK
QYQEARESYLDLDSKVKTLKRFIKLLEEIMIHRYKTYQQFRRCLTLRCKLYFDNLLSQRA
YCGKMNFDHKNETLTISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRC
LDEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERG
QTTLPFRPVSQEDDDDRS
NT seq 3297 nt   +upstreamnt  +downstreamnt
atggccaaaagaaaggaagaaaattttttctctcctgagaatgccaaaagaccaagacaa
gaagaattggacgattttgataaagatgaatgtgatgaagatgaatgtgcagtttctttc
actaatggtacctctactttgacagcagcagaagttggaataattgagagtattcagctc
aaaaacttcatgtgtcattcgatgcttggaccctttaagtttggttctaatgtcaacttt
gttgttggcaataatggaagtggcaagagtgcggtgctcacagctctcatagttggtctt
ggtggaaaagctatcactactaatcgaggatcttctttaaaaggttttgtgaaggatgga
cagaattcagcagatatctcaataacaataaggaacagaggggatgatgcctacagagga
aatgtgtacggcgacactattattgtacaacagcacatcagcatggatggaagtcgatct
tacaaactgaagagtgcaacaggtgctgtgatttctactaagaaagaagaactgattgga
attcttgatcattttaacattcaggtagataatccggtttctgttctaacacaagagatg
agcaagcagttcttgcagtctaaaaatgagggagacaagtacaaattctttatgaaagca
acccaacttgaacaaatgaaggaagactattcatacattatggaaacaaaagaaagaaca
aaagagcagataaatcaaggagaagagcgacttagtgaactaaagcgccagtgtttggag
aaagaagaacgttttcaaaatatcgctggcttaagtacaatgaagaccaacctggaatac
ctgaaacatgaaatggcttgggcagtggtcaatgaaattgaaaagcaattgaatgctatc
agagataacatcaaaattggagaagatcgtgctgctagacttgagaggaaaacggaggag
cagcaggtcagacttaatgaagcagaaaaaaaatacaaagacattcaagataaactagaa
aagattagtcaagagacaagtgcacgagcgccagaatgtatggcactgaaagcagatctt
acttctaagaaaagggcctataatgaagctgaggttttgtataatcgttccctaaatgag
tataaagcattaaagaaagatgatgagcagctctgcagaagaattgaagaactgaaaaaa
agtgccgatcagtctttggaacctgaacggttggaaaggcaaaaaaaaatatcttggtta
aaagagagaataaaggccttacaagatcaagaaagttcagtcaatcaagagatcgaacaa
tttcagcaagccatagaaaaagacaaagaagaacataccaggattaagagagaagagtta
gatgtgaagactacactgaactttaaccagaggcaactgaaagaattgaaagatagtaaa
actgatcgactcaaaagatttggccctcacgttccagctcttcttgaagccatagatgat
gcctacagacggggacactttacctataaacctgtaggcccattaggagcttgcattcat
cttcgggaccctgagcttgctttggctattgaatcttgcttaaaaggacttcttcaagcc
tattgttgccataaccatgccgatgaaagagtgcttcaggcattgatgaaaaagttttat
tcaccagggacctcacggccacagataatagtttctgagtttcggaatgagatgtatgat
gtaagacacagagctgcatatcatccagagtacccaacagttctgacagcgttagaaata
gataatgcagttgttgcaaatagcctgattgacatgcgaagcatagagacagtgctgcta
atcaaaaataattctgtagctcgtgcagtgatgcaatcccaaaagccacccaagaattgt
agagaagcttttactgctgatggtgatcaggtttttgcagggcgttattattcatctgaa
tatacaagacctaagtttctaagcagagatgtggattctgaaataagtgacttggaggat
gaagttgaaaataagaaagcccagatattaaatcttcagcaacatctgtctacccttcaa
aaggatattaaatgcaatgaagaacttctcagaaggtaccaactgcattacaaagagtta
aagatgaaaataaggaaaagtatttctgaaattcgggaacttgagaatatagaagaacac
cagtctgtagatattgcaaccttggaagatgaagctcaagaaaataaaatcaagatgaaa
atggttgagaaaaatatggaacaacaaaaagaaaatatggaacatcttaaaagcctgaaa
gtagaagcagaaaacaagtatgatgaaattaaacagaaaattaatcagctctcagagcta
gcagatccacttaaggatgaattaaaccttgctgattctgaagtggataaccaaaagcga
gggaaacggcattatgaagacaagcagaaagaacacttggatactttaaataaaaagaaa
cgagaactagatatgaaagaaaaagagctagaggagaaaatgtcacaagcaagacaaatc
tgtccagagcggatagaagtgaaaaaatctgcctcaattctagacaaagaaattaataga
ttaagacagaagatacaggcagaacatgctagttatggagatcgagaggaaataatgaag
caatatcaagaggcaagagaaagctatcttgatttggatagcaaagtaaagactttaaaa
aggtttattaaattactggaagaaataatgatccatagatataaaacatatcaacaattt
agaaggtgtttgactttacgatgtaaattgtactttgacaacttactatctcagcgggcg
tattgtggaaaaatgaattttgaccacaagaatgaaactcttactatatcagttcagcct
ggagaaggaaacaaagccgctttcaatgacatgcgggccttatctggcggtgaacgttcg
ttttccacggtttgcttcattctttctctgtggtccattgctgaatctcctttcagatgc
ctggatgagtttgatgtctacatggatatggttaaccggaggattgcaatggacatgata
ctcaagatggcagattcccagcgcttcagacagtttatcctgcttacccctcaaagcatg
agttcacttccatcaagtaaactgattagaattcttcgaatgtctgatcctgaaagagga
caaactacattgcctttccgacctgtatctcaagaagacgacgacgaccggagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (45)   

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