KEGG   Bos taurus (cow): 512144
Entry
512144            CDS       T01008                                 
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
  KO
K20299  vacuolar protein sorting-associated protein 53
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bta04131]
    512144 (VPS53)
Membrane trafficking [BR:bta04131]
 Protein recycling
  Others
   EARP complex
    512144 (VPS53)
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    512144 (VPS53)
SSDB
Motif
Pfam: Vps53_N VPS53_C Vps54_N COG4_N FBF1 GrpE Sec8_N Laminin_II XhlA Tropomyosin Syndetin_C NBD94 COG3_N hAT-like_RNase-H COG5_N NFRKB_winged MCPsignal Med11 Snf7 ING VPS51_Exo84_N
Other DBs
NCBI-GeneID: 512144
NCBI-ProteinID: NP_001180097
Ensembl: ENSBTAG00000018126
VGNC: 36829
UniProt: E1BJW7
Position
19:22125877..22249150
AA seq 832 aa
MMEEEELEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACQVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPREWYMAERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPASTNPFLEDEPAAEMEELAMEKGDLEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTISSLLKEKEGSE
AAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELFRQRLPAPPSGPEGSSSLSLLAPTPEQESSRIRKLEKLIKKRL
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgatggaggaggaggaactggagttcgtagaagagctggaagccgtgctgcagctcacg
cccgacgtgcagctcgccatcgagcaggtatttccaagccaggatcctctagatagagca
gatttcaatgctgtggagtatatcaacaccctgttcccaacagagcaatctctggcaaac
attgatgaagtcgtgaacaagattagactgaaaataaggagactggatgacaacattcga
actgtcgtaagaggtcaaacaaatgtgggacaggatggcaggcaagcacttgaagaggcc
cagaaagccatacagcagctttttggaaaaatcaaagatatcaaagacaaagcagaaaaa
tcagagcaaatggtgaaggaaatcacccgtgacattaagcagttagatcacgccaaacgc
cacctgaccacctcgatcacaacgctgaaccacctgcacatgctggcgggtggcgtggat
tccctcgaagccatgaccaggcgaaggcagtacggagaagttgctaatcttcttcagggc
gtaatgaatgttctggagcacttccacaaatatatgggcattccacagatccggcagctt
tctgaaagagtgaaggcggcccagactgagttaggacagcaaatcctggccgattttgaa
gaagcttttccttcccagggcaccaagaggccaggaggacccagcaacgttctacgagat
gcgtgtcaggttgctaacatcttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaaacaacatctgtcagagtacctagtactttttcaagaaaaccaagatgttgcctgg
ctggacaaaatcgaccgtcgctatgcctggatcaaacgccagctcgtggactatgaggag
aaatatggccggatgttcccacgtgagtggtacatggcggagagaattgccgtagaattt
tgccacataacaaggacagaacttgccaagatcatgcgtacaagagcaaaggaaattgaa
gtgaaattgcttctctttgctattcagagaacgactaactttgagggatttcttgcaaaa
cgcttttccgggtgcaccctgacagatggaacgctgaaaaaacttgaatctccacccgca
tccaccaatcccttcctggaagatgagccagcagcagaaatggaggaactggcgatggag
aaaggagatttagagcaacctaagaagcctaaagccccagacaatccatttcacggcatt
gtttccaagtgttttgagccgcatctctacgtgtacattgagtcccaggacaaaaacctt
ggagagctgatagatcggtttgtggccgatttcaaggcccagggcccacctaagcccaac
acggacgaggggggtgccgtgctccccagctgcgccgacctcttcgtctactacaagaag
tgcatggtgcagtgctcgcagctcagtactggggagcccatgatcgccctgaccactatt
ttccagaagtacctccgcgagtatgcctggaaaatcctctctggcaacctgcccaaaacc
acaagcagcagtggcgggctgaccatcagcagcctgctcaaggaaaaggagggctccgag
gcggccaagttcaccctggaggagctctgcctcatctgcagcatcctgagcactgcagag
tactgcctggccaccacccagcagctggaagagaaactcaaggagaaggtcgacgtgagt
ctgactgaacgaatcaatctgactggagaaatggacacgttcagcactgtcatctccagc
agcattcagctgttggttcaggacctggatgctgcctgtgaccccgcccttacagccatg
agcaagatgcagtggcagaacgtggagcacgttggtgaccagagcccctacgtcacgtcg
gtcatccttcacattaaacagaacgtccccatcatccgtgacaacctggcctccacgcgg
aaatacttcacgcagttctgcattaaatttgcaaactccttcattcccaagttcatcacc
cacctcttcaagtgcaagccaatcagcatggtgggggcagaacagctactgctggacaca
cactccctgaagatggtcctgcttgatctgccttccatcggctctcaggtggtgaggaaa
gccccggccagttataccaagatcgtggtgaaaggcatgacccgcgcggagatgatcctc
aaggttgtgatggcccctcacgagccgttggtggtatttgtggacaattacatcaagctc
ctgacagactgcaacacagaaaccttccagaagattctggacatgaaggggctgaagcgg
agtgagcagagcagcatgctggagctcttccgccagaggctccccgccccgccctcagga
cccgaaggctccagctccctgtccctcctggctccaactcctgaacaggagtcctcacgc
atccgcaaactggagaaactgattaaaaagagactgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (37)   

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